Factsheet for Bra033895.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033543.1-P	Field mustard	cytosol	93.56	49.45
AT3G22980.2	Thale cress	cytosol	93.14	44.14
CDY10688	Canola	cytosol	76.51	42.2
VIT_04s0044g01790.t01	Wine grape	cytosol	72.77	33.98
KRG94823	Soybean	cytosol	71.93	33.86
Solyc11g071770.1.1	Tomato	cytosol	69.44	32.62
PGSC0003DMT400007735	Potato	cytosol	68.61	32.26
GSMUA_Achr2P17400_001	Banana	cytosol	55.09	32.16
KXG30393	Sorghum	nucleus	53.85	29.37
Os03t0650700-01	Rice	cytosol	58.84	27.5
TraesCS5B01G373200.1	Wheat	cytosol	57.8	26.6
KXG37923	Sorghum	cytosol	57.59	26.51
Zm00001d033505_P001	Maize	cytosol	57.38	26.44
TraesCS5D01G380500.1	Wheat	cytosol	57.38	26.41
TraesCS5A01G370800.1	Wheat	cytosol	57.17	26.32
Os02t0543300-00	Rice	mitochondrion	52.6	25.17
HORVU5Hr1G092260.1	Barley	nucleus, plastid	56.96	23.5
Bra010781.1-P	Field mustard	cytosol	26.4	23.01
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	46.78	22.73
TraesCS1B01G062700.1	Wheat	cytosol	47.4	22.66
HORVU1Hr1G009320.1	Barley	nucleus	40.75	21.92
TraesCS1D01G049600.1	Wheat	cytosol	40.12	20.15
Bra010782.1-P	Field mustard	cytosol	26.61	15.18
Bra017279.1-P	Field mustard	cytosol	27.03	14.81
Bra020542.1-P	Field mustard	cytosol	26.82	13.65
Bra024798.1-P	Field mustard	cytosol	23.7	11.59
Bra030642.1-P	Field mustard	cytosol	23.7	11.55
Bra027021.1-P	Field mustard	plastid	14.76	9.16
Bra004884.1-P	Field mustard	plastid	13.1	8.34
Bra028444.1-P	Field mustard	mitochondrion	8.73	6.35
Bra028651.1-P	Field mustard	plastid	8.52	5.99
Bra022824.1-P	Field mustard	mitochondrion	7.07	5.39
Bra021694.1-P	Field mustard	mitochondrion	7.28	5.37
Bra008811.1-P	Field mustard	plastid	6.65	4.75
KRH40894	Soybean	cytosol	1.04	1.45

Protein Annotations

EnsemblPlants:Bra033895.1	EnsemblPlants:Bra033895.1-P	EnsemblPlantsGene:Bra033895	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870
InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:IPR014721	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	PANTHER:PTHR42908
PANTHER:PTHR42908:SF12	PFAM:PF00679	SEG:seg	SMART:SM00838	SUPFAM:SSF54211	SUPFAM:SSF54980
UniParc:UPI0002547346	UniProt:M4EYK3	MapMan:17.1.2.2.3.4	:	:	:

Description

AT3G22980 (E=2e-238) | elongation factor Tu family protein

Coordinates

chrA05:+:14894622..14896067

Molecular Weight (calculated)

53050.2 Da

IEP (calculated)

5.061

GRAVY (calculated)

-0.273

Length

481 amino acids

Sequence
(BLAST)

001: MEFQVSPTLR VAIEPSDPSD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CIKDLIDRFA RVNIEVSSPL VSYRETIEGD GSNLLESLRS
101: LSLNASDYVE KRTPNGRCVI RVHVMKLPHS LTKLLDESTD LLGDIIGGKG SHSIKILESQ SPSLEENVDP IEALKSQLVE AGVSSSSETE NDREKCKAEW
201: AKLLKRIWAL GPREKGPNIL FAPDGRRICE DGSILVRGSP HVSQRLGFTE DSTETPPDSA LYSEALTLES SIVSGFQLAT ASGPLCDEPM WGLAFTIESH
301: LAQDSETEKQ PENFGIFTGQ VMTAVKDACR AAVLQTNPRI VEAMYFCELN TAPEYLGPMY AVLSRRRARV LKEEMQEGSS LFTVHAYVPV SESFGFADEL
401: RKGTSGGASA LMVLSHWEML EEDPFFVPKT EEEIEEFGDG ASVLPNTARK LINAVRRRKG LHVEEKVVQH ATKQRTLARK V

Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)

0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV

Arabidopsis Description

Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.