Factsheet for Bra010781.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70516	Canola	cytosol	92.03	99.8
TraesCS2A01G234500.1	Wheat	cytosol	19.57	86.4
TraesCS7A01G288600.1	Wheat	cytosol	19.02	86.07
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	19.38	85.6
HORVU5Hr1G116710.1	Barley	cytosol	86.78	81.6
TraesCS4A01G363900.1	Wheat	plastid	86.23	72.45
Zm00001d020342_P001	Maize	mitochondrion	51.27	70.93
Bra010782.1-P	Field mustard	cytosol	99.46	65.12
AT1G56070.2	Thale cress	cytosol	96.01	62.87
Bra017279.1-P	Field mustard	cytosol	99.09	62.3
KRH13696	Soybean	nucleus	93.66	61.33
KRH43759	Soybean	nucleus	93.48	61.21
GSMUA_Achr10P...	Banana	cytosol	84.24	60.31
Solyc08g062920.2.1	Tomato	nucleus, plastid	90.4	60.27
VIT_19s0027g00760.t01	Wine grape	cytosol	92.93	60.14
AT3G12915.2	Thale cress	cytosol	85.51	59.9
Zm00001d012770_P001	Maize	plastid	91.3	59.79
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	91.3	59.79
KXG37185	Sorghum	cytosol	91.3	59.79
KXG37183	Sorghum	cytosol	91.3	59.79
Zm00001d034776_P001	Maize	cytosol	91.12	59.67
Zm00001d034773_P001	Maize	cytosol	91.12	59.67
EES01455	Sorghum	cytosol	91.12	59.67
Zm00001d034771_P002	Maize	cytosol	90.94	59.55
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	90.94	59.55
TraesCS5D01G509600.1	Wheat	cytosol	90.94	59.55
TraesCS5B01G509600.1	Wheat	cytosol, golgi	90.94	59.55
TraesCS5B01G509500.1	Wheat	cytosol, golgi, nucleus	90.94	59.55
TraesCS7D01G449300.1	Wheat	cytosol	90.58	59.31
HORVU7Hr1G106150.1	Barley	cytosol	90.4	59.19
TraesCS7B01G362600.1	Wheat	cytosol	90.4	59.19
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	90.4	59.19
TraesCS5B01G509700.1	Wheat	cytosol, golgi	90.4	59.19
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	90.4	59.19
TraesCS3D01G220900.1	Wheat	golgi	90.22	59.07
HORVU3Hr1G057890.1	Barley	cytosol	90.04	58.96
TraesCS3B01G261500.1	Wheat	cytosol	90.04	58.96
TraesCS3A01G232300.1	Wheat	cytosol, golgi	90.04	58.96
HORVU3Hr1G057880.1	Barley	cytosol	90.04	58.96
TraesCS5D01G509700.1	Wheat	cytosol	88.04	58.91
Bra020542.1-P	Field mustard	cytosol	99.46	58.1
GSMUA_Achr4P01020_001	Banana	cytosol	91.12	57.88
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	80.25	57.53
Os01t0742200-01	Rice	cytosol, nucleus	84.6	56.54
TraesCS1B01G033500.1	Wheat	cytosol	39.31	53.85
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.49	52.28
KRH13692	Soybean	cytosol, mitochondrion	67.21	51.89
KRH13693	Soybean	mitochondrion	74.82	49.94
TraesCS1D01G026800.1	Wheat	cytosol	55.43	43.97
TraesCS1D01G023700.1	Wheat	cytosol	58.88	38.64
TraesCS1A01G027600.1	Wheat	cytosol	58.33	38.11
TraesCSU01G002600.1	Wheat	cytosol	58.33	37.31
HORVU1Hr1G003960.9	Barley	cytosol	57.07	34.16
TraesCS5D01G509800.1	Wheat	cytosol	24.46	30.2
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	23.01	26.4
Bra030642.1-P	Field mustard	cytosol	41.3	23.1
Bra024798.1-P	Field mustard	cytosol	41.12	23.07
Bra033543.1-P	Field mustard	cytosol	29.71	18.02
Os05t0467501-00	Rice	cytosol	12.5	15.13
Bra027021.1-P	Field mustard	plastid	20.11	14.32
OQU75622	Sorghum	cytosol	7.79	12.68
Bra022824.1-P	Field mustard	mitochondrion	14.49	12.68
Bra004884.1-P	Field mustard	plastid	17.21	12.58
Bra021694.1-P	Field mustard	mitochondrion	13.95	11.81
Bra028444.1-P	Field mustard	mitochondrion	12.5	10.44
Bra028651.1-P	Field mustard	plastid	12.86	10.38
Bra008811.1-P	Field mustard	plastid	11.96	9.79
KRH43761	Soybean	cytosol, nucleus, plastid	1.99	5.5

Protein Annotations

MapMan:17.5.2.1	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	EnsemblPlantsGene:Bra010781
EnsemblPlants:Bra010781.1	EnsemblPlants:Bra010781.1-P	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	InterPro:IPR014721	UniProt:M4D2S8	PFAM:PF00679
PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI0002546F15	:	:	:

Description

AT1G56070 (E=2e-298) LOS1 | LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding

Coordinates

chrA08:-:16417517..16420016

Molecular Weight (calculated)

61597.6 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.255

Length

552 amino acids

Sequence
(BLAST)

001: MVKFTSDELR RIMDYKHNIR NMSVIAHVDH GTTWLPASTA LLEMMIFHLP SPHTAQRYRV ENLYEGPLDD QYATAIRNCD PNGPLMLYVS KMIPASDKGR
101: FFAFGRVFSG KVSTGMKVRI MGPNFVPGEK KDLYVKSVQR TVIWMGKRQE TVEDVPCGNT VAMVGLDQFI TKNATLTNEK EVDAHPIRAM KFSVSPVVRV
201: AVQCKVASDL PKLVEGLKRL AKSDPMVVCT MEESGEHIVA GAGELHLEIC LKDLQDDFMG GAEIVKSDPV VSFRETVLER SVRTVMSKSP NKHNRLYMEA
301: RPLEDGLAEA IDDGRIGPRD DPKIRSKILA EEFGWDKDLA KKIWAFGPET TGPNMVVDMC KGVQYLNEIK DSVVAGFQWA SKEGPLCDEN MRGICFEVCD
401: VVLHSDAIHR GGGQVIPTAR RVIYASQITA KPRLLEPVYM VEIQAPEGAL GGIYSVLNQK RGHVFEEMQR PGTPLYNIKA YLPVVESFGF SSQLRAATSG
501: QAFPQCVFDH WEMMSSDPLE AGSQASTLVT DIRKRKGMKE QMTPLSDFED KL

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.