Factsheet for Bra022824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84803	Canola	mitochondrion	91.44	92.47
Bra021694.1-P	Field mustard	mitochondrion	90.33	87.42
AT2G31060.3	Thale cress	mitochondrion	91.92	86.44
KRH55837	Soybean	plastid	83.52	78.66
KRH25682	Soybean	plastid	83.2	78.36
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	82.41	77.38
PGSC0003DMT400024321	Potato	mitochondrion	80.82	76.58
Solyc07g053470.2.1	Tomato	mitochondrion	80.67	76.43
GSMUA_Achr8P27160_001	Banana	mitochondrion	78.13	73.58
EES01486	Sorghum	mitochondrion	77.65	72.81
Os01t0752700-01	Rice	mitochondrion	77.02	72.21
TraesCS3D01G291300.1	Wheat	mitochondrion	76.39	71.62
TraesCS3B01G326200.1	Wheat	mitochondrion	76.39	71.62
TraesCS3A01G291600.1	Wheat	mitochondrion	76.23	71.47
HORVU3Hr1G072230.1	Barley	plastid	76.07	69.06
Zm00001d043494_P005	Maize	mitochondrion	77.5	65.9
Bra008811.1-P	Field mustard	plastid	39.46	36.94
Bra028444.1-P	Field mustard	mitochondrion	23.93	22.84
Bra028651.1-P	Field mustard	plastid	24.09	22.22
Bra004884.1-P	Field mustard	plastid	19.65	16.42
Bra027021.1-P	Field mustard	plastid	19.65	16.0
Bra010782.1-P	Field mustard	cytosol	20.92	15.66
Bra017279.1-P	Field mustard	cytosol	21.08	15.15
Bra010781.1-P	Field mustard	cytosol	12.68	14.49
Bra020542.1-P	Field mustard	cytosol	21.08	14.07
Bra024798.1-P	Field mustard	cytosol	18.23	11.69
Bra030642.1-P	Field mustard	cytosol	18.07	11.55
Bra033543.1-P	Field mustard	cytosol	14.26	9.89
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	5.39	7.07

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	EnsemblPlantsGene:Bra022824	EnsemblPlants:Bra022824.1	EnsemblPlants:Bra022824.1-P	ncoils:Coil	InterPro:EFG_III/V
InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M4E224
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI00025402AE
SEG:seg	:	:	:	:	:

Description

AT2G31060 (E=1e-218) | elongation factor family protein

Coordinates

chrA03:-:7263841..7268202

Molecular Weight (calculated)

68721.1 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.195

Length

631 amino acids

Sequence
(BLAST)

001: MAGPLLRSLW SNTTRRRSFS SQSSPLSPLR AFSAATGAPP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER ERGITISSKV
101: TSVFWKENEL NMVDTPGHAD FGGEACVERV VGMVEGAILV VDAGEGPLAQ TKFVLAKALK YGLRPILLLN KVDRPSVSEE RCDEVESLVF DLFANLGATD
201: ARNMSQLLDA VVKHVPPPKA DLDAPFLMLV SMMEKDYYLG RILTGRVSSG VVRVGDKVIG LRNTDSGSEK IEEAKVVKLM KKKGTTIVSI DAAGAGDIIC
301: MAGLTTPSIG HTVASAEVTT ALPSVELDPP TISMTFGVND SPLAGRDGTQ LTGGKIGDRL MAEAETNLAI NVIPGLSESF EVQGRGELQL GILIENMRRE
401: GFELSVSPPK VMYKTEDKQR LEPIEEVTIE INEEHVGLVI ESLSHRRAEV IDMCPVPGND GRTRLSLTCP SRGLVGYRCV FSSDTRGTGF MHRAFLKYEK
501: YRGPLGNVRK GVLVSMGYGT ITAHSLMGLE ARGTLFVSPG LDSYDGMIIG EHSRDTDLDV NPVKAKELTN IRSVNKDENV KLSPPRLMTL EEAIGYVASD
601: ELIEVTPKTI RLRKRCLDVT KRKSQSKRAK E

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.