Factsheet for Solyc07g053470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024321	Potato	mitochondrion	98.65	98.65
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	83.18	82.44
AT2G31060.3	Thale cress	mitochondrion	81.98	81.37
KRH55837	Soybean	plastid	81.83	81.34
CDX84803	Canola	mitochondrion	75.83	80.93
KRH25682	Soybean	plastid	81.23	80.75
Bra022824.1-P	Field mustard	mitochondrion	76.43	80.67
CDY19061	Canola	mitochondrion	80.78	80.42
CDY54484	Canola	mitochondrion	80.78	80.42
Bra021694.1-P	Field mustard	mitochondrion	78.08	79.75
GSMUA_Achr8P27160_001	Banana	mitochondrion	77.78	77.31
EES01486	Sorghum	mitochondrion	75.83	75.04
Os01t0752700-01	Rice	mitochondrion	75.68	74.89
TraesCS3D01G291300.1	Wheat	mitochondrion	74.32	73.55
TraesCS3B01G326200.1	Wheat	mitochondrion	74.32	73.55
TraesCS3A01G291600.1	Wheat	mitochondrion	74.02	73.25
HORVU3Hr1G072230.1	Barley	plastid	73.87	70.79
Zm00001d043494_P005	Maize	mitochondrion	74.92	67.25
Solyc03g058190.2.1	Tomato	plastid	37.99	37.65
Solyc04g015450.2.1	Tomato	nucleus	25.08	24.52
Solyc03g058880.2.1	Tomato	mitochondrion	22.52	22.73
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	18.77	16.23
Solyc08g079180.2.1	Tomato	plastid	19.07	16.14
Solyc08g062920.2.1	Tomato	nucleus, plastid	19.82	15.94
Solyc01g090690.2.1	Tomato	plastid	18.17	15.92
Solyc07g007210.2.1	Tomato	nucleus	18.17	13.08
Solyc11g071770.1.1	Tomato	cytosol	18.62	12.11

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795
UniProt:K4CFP4	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	EnsemblPlantsGene:Solyc07g053470.2	EnsemblPlants:Solyc07g053470.2.1	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394
InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI000276BE32	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:61907570..61926911

Molecular Weight (calculated)

71994.2 Da

IEP (calculated)

7.206

GRAVY (calculated)

-0.159

Length

666 amino acids

Sequence
(BLAST)

001: MVGPLLRSLW STTRRSFSSS HYSHIKPLSY ARAFSTATAT APVGSAATAP GGALDPGRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RALDSIDLER
101: ERGITIASKV TSISWKDKEL NMVDTPGHAD FGGEVERVVG MVEGAVLVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DKPAVTEERC NEVESLVFDL
201: FANLGASEEQ LDFPVLYASA KEGWASSIYT KSPPDVKDMS QLLNAIVGHV PPPSASLDAP FQMLVSMMEK DPYLGRVLTG RVTCGVVRVG DKVQGLKNTD
301: NGTVKIEEGK VVKLMKKKGM RADPVDSAGA GDIVSLAGLS SPTIGHTVAN AEVMTALPTV VLDPPTISMT FGVNDSPLAG SDGIHLTGGK IGDRLLAESE
401: TNLAINVLPS TSESYEVQGR GELQLGILIE NMRREGFELS VSPPKVMYKV EKGTKLEPIE EVTIEVDDEH VGLVMEALSH RRGEVTDMGP VPGSMGRTRM
501: CLTCPSRGLV GYRSVFSSDT RGSGFMHRAF LTYEKYRGPL GNVRKGVLVS MGRGLITAHA LMGLEPRGVL FVAPAMETYD GMIIGEHSRD TDLDVNPVKA
601: KELNNIRCAS KDENVKLTPP RLMSLEEAIG YVASDELIEV TPKAIRLRKR YLEVNKRKSM SKRPKD

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.