Factsheet for TraesCS3D01G291300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G326200.1	Wheat	mitochondrion	99.7	99.7
TraesCS3A01G291600.1	Wheat	mitochondrion	99.41	99.41
HORVU3Hr1G072230.1	Barley	plastid	98.51	95.4
EES01486	Sorghum	mitochondrion	89.9	89.9
Os01t0752700-01	Rice	mitochondrion	88.41	88.41
Zm00001d043494_P005	Maize	mitochondrion	88.56	80.32
GSMUA_Achr8P27160_001	Banana	mitochondrion	79.94	80.3
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	78.45	78.57
CDX84803	Canola	mitochondrion	71.77	77.4
KRH55837	Soybean	plastid	76.52	76.87
KRH25682	Soybean	plastid	76.37	76.72
Bra022824.1-P	Field mustard	mitochondrion	71.62	76.39
CDY19061	Canola	mitochondrion	75.04	75.49
CDY54484	Canola	mitochondrion	74.89	75.34
AT2G31060.3	Thale cress	mitochondrion	74.89	75.11
Bra021694.1-P	Field mustard	mitochondrion	72.36	74.69
Solyc07g053470.2.1	Tomato	mitochondrion	73.55	74.32
PGSC0003DMT400024321	Potato	mitochondrion	73.4	74.17
TraesCS6D01G183500.1	Wheat	plastid	37.44	37.5
TraesCS6D01G120800.1	Wheat	plastid	23.33	23.43
TraesCS7D01G081700.2	Wheat	mitochondrion	21.4	21.62
TraesCS5D01G509800.1	Wheat	cytosol	12.33	18.57
TraesCS2D01G383800.1	Wheat	mitochondrion, plastid	19.17	16.8
TraesCS3D01G220900.1	Wheat	golgi	20.06	16.01
TraesCS7D01G344300.4	Wheat	mitochondrion	18.28	15.77
TraesCS5D01G509600.1	Wheat	cytosol	19.61	15.66
TraesCS7D01G449300.1	Wheat	cytosol	19.61	15.66
TraesCS5D01G509700.1	Wheat	cytosol	19.17	15.64
TraesCS1D01G023700.1	Wheat	cytosol	19.47	15.58
TraesCS1D01G049600.1	Wheat	cytosol	18.43	12.94
TraesCS7D01G376800.1	Wheat	cytosol	17.98	12.17
TraesCS5D01G380500.1	Wheat	cytosol	18.87	12.15
TraesCS1D01G026800.1	Wheat	cytosol	12.18	11.78

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR01394	EnsemblPlantsGene:TraesCS3D01G291300	EnsemblPlants:TraesCS3D01G291300.1	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	TIGR:cd01891
TIGR:cd03691	TIGR:cd16263	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:401291182..401304813

Molecular Weight (calculated)

72954.6 Da

IEP (calculated)

7.426

GRAVY (calculated)

-0.123

Length

673 amino acids

Sequence
(BLAST)

001: MAAALLLRGL RSSASRARPA FLSPASAPPP FASSLLHRLY SSAAASAASP PASALGGVTD PARIRNVAVI AHVDHGKTTL MDRLLRQCGA DIPHERAMDN
101: ISLERERGIT ISSKVTSVSW KENELNMVDT PGHADFGGEV ERVVGMVEGA VLVVDAGEGP LAQTKFVLSK ALKYGLRPIL LLNKVDRPSV SEETCNEVES
201: LVFDLFANLG ATEEQLDFPV LYASAKEGWA SLKFTKCPPD SEKNMSPLLD SIVQHVRSPK ADLEAPFQML VSMMERDFYL GRILTGRVTS GVIRVGDKVH
301: GLRITDEGVQ KIEDGKVVKL MKKKGTSMAV IEAAGAGDII SMAGLSGPAI GHTVANPEVL TALPAVELDP PTISMTFGVN DSPLAGRDGT HVTGAKIGNR
401: LMAEAETNLA INVLPGPLSE SYEVQGRGEL QLGILIENMR REGFELSVSP PRVMYKTERG ERLEPIEEVT VEVDEEHIGF VLETLNNRKG ELLDMGPVPG
501: TTGRTRVFMT CPSRGLVGVK GVFNSFTRGT GFMHRAFQAY AKYRGPLGTV RKGVLVSVGR GFITSHALMS LEARGTLFVS PGMETYEGMI VGEHSRDSDL
601: EINPVRTKEL TNIRAPGKDE NIRLSPPRLM TLEEAIGYVA VDELIEVTPK VIRLRKKYLD ANKRKMMKNK IMQ

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.