Factsheet for Bra021694.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19061	Canola	mitochondrion	99.23	96.71
CDY54484	Canola	mitochondrion	98.62	96.11
Bra022824.1-P	Field mustard	mitochondrion	87.42	90.33
AT2G31060.3	Thale cress	mitochondrion	90.8	88.23
KRH55837	Soybean	plastid	81.9	79.7
KRH25682	Soybean	plastid	81.9	79.7
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	81.29	78.87
PGSC0003DMT400024321	Potato	mitochondrion	80.06	78.38
Solyc07g053470.2.1	Tomato	mitochondrion	79.75	78.08
GSMUA_Achr8P27160_001	Banana	mitochondrion	77.3	75.22
EES01486	Sorghum	mitochondrion	76.07	73.7
Os01t0752700-01	Rice	mitochondrion	75.77	73.4
TraesCS3B01G326200.1	Wheat	mitochondrion	74.69	72.36
TraesCS3D01G291300.1	Wheat	mitochondrion	74.69	72.36
TraesCS3A01G291600.1	Wheat	mitochondrion	74.39	72.07
HORVU3Hr1G072230.1	Barley	plastid	74.23	69.64
Zm00001d043494_P005	Maize	mitochondrion	75.61	66.44
Bra008811.1-P	Field mustard	plastid	38.8	37.54
Bra028651.1-P	Field mustard	plastid	24.39	23.25
Bra028444.1-P	Field mustard	mitochondrion	22.85	22.54
Bra004884.1-P	Field mustard	plastid	19.17	16.56
Bra027021.1-P	Field mustard	plastid	19.48	16.39
Bra010782.1-P	Field mustard	cytosol	20.4	15.78
Bra017279.1-P	Field mustard	cytosol	20.4	15.15
Bra020542.1-P	Field mustard	cytosol	20.55	14.18
Bra010781.1-P	Field mustard	cytosol	11.81	13.95
Bra024798.1-P	Field mustard	cytosol	18.25	12.09
Bra030642.1-P	Field mustard	cytosol	18.1	11.96
Bra033543.1-P	Field mustard	cytosol	14.57	10.44
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	5.37	7.28

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	EnsemblPlantsGene:Bra021694	EnsemblPlants:Bra021694.1	EnsemblPlants:Bra021694.1-P	InterPro:EFG_III/V	InterPro:EFG_V-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M4DYU8	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI00025449AF	SEG:seg	:

Description

AT2G31060 (E=1e-282) | elongation factor family protein

Coordinates

chrA04:-:13889391..13893913

Molecular Weight (calculated)

70982.5 Da

IEP (calculated)

8.350

GRAVY (calculated)

-0.230

Length

652 amino acids

Sequence
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS SQSLHLKSRF SLSSLRAFSA ASASTAAAGA PSSSLDPNRL RNVAVIAHVD HGKTTLMDRI LRQCGADIPH ERAMDSINLE
101: RERGITISSK VTSVFWKDNE LNMVDTPGHA DFGGEVERVV GMVEGAILVV DAGEGPLAQT KFVLAKALKY GLRPILLLNK VDRPSVSEER CDEVESLVFD
201: LFANLGATEE QLDFPVLYAS AKEGWASSTF TKEPPADAKN MSQLLDAVVK YVPPPKADLD EPFLMLVSMM EKDFYLGRIL TGRVSSGVVR VGDKISGLRQ
301: TETGSSEKIE EAKVVKLMKK KGTTIVSIDA AGAGDIICMA GLTAQSIGHT VARVEVTTAL PAVELDPPTI SMTFGVNDSP LAGRDGTQLT GGKIGDRLLA
401: EAETNLAINV IPGLSESFEV QGRGELQLGI LIENMRREGF ELSVSPPKVM YKTENKQKLE PIEEVIIEIN EEHVGSVMEA LSHRRAEVTD MGPVPGNDGR
501: TRLTLTCPSR GLVGYRCVFS SDTRGTGFMH RAFLRYEKYR GPLGNVRKGV LVSMGYGTIT SHSLMGLEAR GTLFVSPGLD SYDGMIIGEH SRDTDLDVNP
601: VKAKELTNIR SANKDENVKL SPPRLVTPKR IRLRKRCLDV TKRKSQSKRA KD

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.