Factsheet for Bra028651.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40739	Canola	plastid	99.42	99.42
CDY44781	Canola	plastid	97.22	98.52
AT5G08650.1	Thale cress	plastid	92.4	92.8
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	71.49	86.7
HORVU6Hr1G025120.1	Barley	cytosol	13.6	86.11
VIT_07s0031g03050.t01	Wine grape	plastid	80.7	81.18
Solyc04g015450.2.1	Tomato	nucleus	79.53	79.88
PGSC0003DMT400070154	Potato	plastid	79.39	79.62
KRH53996	Soybean	plasma membrane	79.24	78.89
OQU84405	Sorghum	plastid	77.19	78.45
Zm00001d053861_P005	Maize	plastid	76.75	78.12
TraesCS6D01G120800.1	Wheat	plastid	75.44	77.01
TraesCS6B01G159200.1	Wheat	plastid	75.29	76.87
TraesCS6A01G130900.1	Wheat	plastid	75.29	76.87
KRH63943	Soybean	plastid	78.8	71.87
HORVU6Hr1G025110.1	Barley	plastid	55.85	71.54
Bra028444.1-P	Field mustard	mitochondrion	45.91	47.5
Bra021694.1-P	Field mustard	mitochondrion	23.25	24.39
Bra022824.1-P	Field mustard	mitochondrion	22.22	24.09
Bra008811.1-P	Field mustard	plastid	23.54	23.89
Bra004884.1-P	Field mustard	plastid	20.03	18.15
Bra027021.1-P	Field mustard	plastid	18.27	16.13
Bra010782.1-P	Field mustard	cytosol	18.13	14.71
Bra017279.1-P	Field mustard	cytosol	17.98	14.01
Bra020542.1-P	Field mustard	cytosol	18.42	13.33
Bra010781.1-P	Field mustard	cytosol	10.38	12.86
Bra024798.1-P	Field mustard	cytosol	16.52	11.48
Bra030642.1-P	Field mustard	cytosol	16.52	11.45
Bra033543.1-P	Field mustard	cytosol	15.06	11.32
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	5.99	8.52

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EnsemblPlantsGene:Bra028651	EnsemblPlants:Bra028651.1	EnsemblPlants:Bra028651.1-P	InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019904	GO:GO:0045727	InterPro:GUFP
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV
UniProt:M4EIN6	HAMAP:MF_00071	HAMAP:MF_03138	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512
PANTHER:PTHR43512:SF1	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI00025432CC	SEG:seg

Description

AT5G08650 (E=0.0) | GTP-binding protein LepA, putative

Coordinates

chrA02:-:2695177..2699712

Molecular Weight (calculated)

75982.9 Da

IEP (calculated)

6.353

GRAVY (calculated)

-0.155

Length

684 amino acids

Sequence
(BLAST)

001: MAMAYAMDLS PPTFFLSPTS SSSSSPLRRL SSLPISTLHR HSNRKLQILC QSTAGTQPQS QSSNLSDANS KLSARSGQDR LLKVPISKVR NFSIIAHIDH
101: GKSTLADKLL QVTGTVQNRD MKEQFLDNMD LERERGITIK LQAARMRYVY EDTPYCLNLI DTPGHVDFSY EVSRSLAACE GALLVVDASQ GVEAQTLANV
201: YLALENNLEI IPVVNKIDLP GAEPEQVLRE IEEVIGLDCS KAILCSAKEG IGITEILNAI VERIPPPPET ADKPFRALIF DSYYDPYRGV IVYFRVIDGK
301: VKKGDRILFM ASGKDYFADE IGVLSPNQIQ VDELYAGEVG YISASIRSVA DARVGDTITN FSRKAESSLP GYEEATPMVF CGLFPVDADQ FPDLRDALEK
401: LQLNDAALKF EPETSSAMGF GFRCGFLGLL HMEIVQERLE REYNLNLITT APSVVYKVHT VNGDTTMCSN PSLLPQPGLR KSVEEPYVKI ELLTPKDYIG
501: ALMELAQDRR GEFKEMKYIA ENRASLLYEL PLAEMVGDFF DQLKSRTKGY ASMEYSVIGY RESDLIKLDI LINAELVEPL STIVHRDKAY SVGRALTQKL
601: KELIPRQMFK VPIQACIGSK VIASEALSAI RKDVLAKCYG GDISRKKKLL KKQAAGKKRM KAIGRVDVPQ EAFMAVLKLE KEVL

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.