CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53996	Soybean	plasma membrane	89.73	97.96
KRH63332	Soybean	cytosol	33.47	92.62
KRH63330	Soybean	cytosol, plasma membrane	31.73	88.48
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	65.73	87.41
VIT_07s0031g03050.t01	Wine grape	plastid	74.27	81.91
Solyc04g015450.2.1	Tomato	nucleus	74.13	81.64
PGSC0003DMT400070154	Potato	plastid	73.87	81.23
HORVU6Hr1G025120.1	Barley	cytosol	11.6	80.56
CDY44781	Canola	plastid	72.13	80.15
AT5G08650.1	Thale cress	plastid	72.4	79.74
OQU84405	Sorghum	plastid	71.2	79.35
CDY40739	Canola	plastid	72.13	79.09
Bra028651.1-P	Field mustard	plastid	71.87	78.8
Zm00001d053861_P005	Maize	plastid	70.53	78.72
TraesCS6D01G120800.1	Wheat	plastid	69.47	77.76
TraesCS6B01G159200.1	Wheat	plastid	69.33	77.61
TraesCS6A01G130900.1	Wheat	plastid	69.2	77.46
HORVU6Hr1G025110.1	Barley	plastid	52.27	73.41
KRH40434	Soybean	mitochondrion	42.8	47.56
KRH00796	Soybean	nucleus	28.13	32.12
KRH75280	Soybean	mitochondrion	4.8	27.27
KRH25682	Soybean	plastid	20.67	23.13
KRH55837	Soybean	plastid	20.53	22.99
KRH71976	Soybean	nucleus	20.13	22.34
KRH33159	Soybean	nucleus	20.13	22.21
KRH40894	Soybean	cytosol	9.2	19.94
KRG88956	Soybean	mitochondrion	16.67	17.93
KRH75282	Soybean	cytosol	4.27	16.41
KRH57341	Soybean	nucleus, plastid	16.4	15.77
KRH04069	Soybean	nucleus, plastid	16.4	15.63
KRH13696	Soybean	nucleus	16.67	14.83
KRH43759	Soybean	nucleus	16.67	14.83
KRH13692	Soybean	cytosol, mitochondrion	13.87	14.55
KRH75283	Soybean	cytosol, mitochondrion	8.4	14.35
KRH13693	Soybean	mitochondrion	15.73	14.27
KRG94823	Soybean	cytosol	17.6	12.92
KRH43761	Soybean	cytosol, nucleus, plastid	3.33	12.5
KRH03566	Soybean	nucleus	16.4	12.45
KRH20245	Soybean	nucleus	16.13	12.27

Protein Annotations

EntrezGene:100809693	Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300
MapMan:35.1	UniProt:A0A0R0KAP7	EMBL:ACUP02002730	InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like
InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_04G206300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
GO:GO:0045727	InterPro:GUFP	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363	EnsemblPlants:KRH63943
ProteinID:KRH63943	ProteinID:KRH63943.1	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071
HAMAP:MF_03138	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF06421
PFAM:PF13456	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512	PANTHER:PTHR43512:SF1
SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0006EDB82D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:47879784..47890045

Molecular Weight (calculated)

83837.1 Da

IEP (calculated)

7.632

GRAVY (calculated)

-0.188

Length

750 amino acids

Sequence
(BLAST)

001: MAAEICGGSL FLSVKTQLQL QQRNQQNVFF HAQRSRTRRS TTRFHSSKRC FSSSAFPNAS AFRRGAVCQV ASIDFESAAK AGEDRLSKVP VRNIRNFCII
101: AHIDHGKSTL ADKLLQVTGT VHQREMKDQF LDNMDLERER GITIKLQAAR MRYVFENEPY CLNLIDTPGH VDFSYEVSRS LAACEGALLV VDASQGVEAQ
201: TLANVYLALE NNLEIIPVLN KIDLPGAEPD RVIKEIEEIV GLDCSNAILC SAKEGIGIIE ILNAIVARIP PPEDTSKKPL RTLIFDSYYD PYRGVIVYFR
301: VVDGTIKKGD RVYFMASGKD YFADEIGVLS PSQLQVEELY AGEVGYLSAS IRTVADARVG DTVTHYGRKA DNSLPGYEEA TPMVFCGLFP VDADQFPDLR
401: DALEKLQLND AALKFEPETS SAMGFGFRCG FLGLLHMEIV QERLEREYNL SLITTAPSVV YRVHCVNGDT VECSNPSLLP EPGKRKSIEE PFVKIEMLTP
501: KDYIGSLMEL AQERRGQFRE MKFIAENRAS ITYELPLAEM VGDFFDQLKS RSKGYASMEY TFVGYTESNL IKLDIRINGD CVEPLATIVH NDKAYSVGRA
601: LTLKLKELIP RQMFKVPIQA CIGSKVIASE AISAIRKDVL AKCYGGDISR KKKLLKKQAE GKKRMKSIGK VDVPQEAFMA VLKLEKEHQQ LNFHPHLSTI
701: LQIRSLLARN WSVRLQHCYR EGNAPADWLA KHGASNALFL SVQPHLAAFG

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.