Factsheet for HORVU6Hr1G025120.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	88.89	17.02
TraesCS6D01G120800.1	Wheat	plastid	96.3	15.52
TraesCS6B01G159200.1	Wheat	plastid	96.3	15.52
TraesCS6A01G130900.1	Wheat	plastid	96.3	15.52
Zm00001d053861_P005	Maize	plastid	91.67	14.73
OQU84405	Sorghum	plastid	90.74	14.56
CDY44781	Canola	plastid	86.11	13.78
VIT_07s0031g03050.t01	Wine grape	plastid	86.11	13.68
AT5G08650.1	Thale cress	plastid	86.11	13.66
KRH63332	Soybean	cytosol	34.26	13.65
Bra028651.1-P	Field mustard	plastid	86.11	13.6
CDY40739	Canola	plastid	86.11	13.6
Solyc04g015450.2.1	Tomato	nucleus	80.56	12.78
PGSC0003DMT400070154	Potato	plastid	80.56	12.76
KRH53996	Soybean	plasma membrane	80.56	12.66
KRH63943	Soybean	plastid	80.56	11.6
HORVU7Hr1G019550.9	Barley	mitochondrion	56.48	9.13
HORVU5Hr1G116710.1	Barley	cytosol	13.89	2.56
HORVU3Hr1G072230.1	Barley	plastid	13.89	2.16
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	13.89	1.78
HORVU3Hr1G057880.1	Barley	cytosol	13.89	1.78
HORVU3Hr1G057890.1	Barley	cytosol	13.89	1.78
HORVU7Hr1G106150.1	Barley	cytosol	13.89	1.78
HORVU5Hr1G092260.1	Barley	nucleus, plastid	12.04	1.11
HORVU7Hr1G090710.6	Barley	plastid	8.33	0.91
HORVU1Hr1G003960.9	Barley	cytosol	7.41	0.87
HORVU7Hr1G082910.2	Barley	mitochondrion	5.56	0.79
HORVU1Hr1G009320.1	Barley	nucleus	6.48	0.78
HORVU2Hr1G092180.1	Barley	plastid	4.63	0.66
HORVU6Hr1G025110.1	Barley	plastid	1.85	0.37
KRH63330	Soybean	cytosol, plasma membrane	0.0	0.0
HORVU6Hr1G050160.1	Barley	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G025120.1	EnsemblPlantsGene:HORVU6Hr1G025120	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	InterPro:EFG_III/V	InterPro:IPR038363
InterPro:LepA_CTD	InterPro:LepA_C_sf	PANTHER:PTHR43512	PANTHER:PTHR43512:SF1	PFAM:PF06421	SUPFAM:SSF54980
UniParc:UPI000B4748B1	UniProt:A0A287TMM7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:89594788..89597144

Molecular Weight (calculated)

12011.8 Da

IEP (calculated)

9.705

GRAVY (calculated)

0.007

Length

108 amino acids

Sequence
(BLAST)

001: MQMVGDFFDQ LKSRSKGYAS MEYSVVGYRV SDLVKLDIQI NGEPVEALST IVHREKAYAV GRALTQKLKE LIPRQMFKIP IQACIGAKVI ASEALSAIRK
101: DVLSKCYG

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.