Factsheet for HORVU3Hr1G057890.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G057880.1	Barley	cytosol	100.0	100.0
TraesCS3D01G220900.1	Wheat	golgi	98.58	98.58
TraesCS3B01G261500.1	Wheat	cytosol	98.58	98.58
TraesCS3A01G232300.1	Wheat	cytosol, golgi	98.34	98.34
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	94.54	94.54
HORVU7Hr1G106150.1	Barley	cytosol	93.71	93.71
GSMUA_Achr10P...	Banana	cytosol	85.53	93.51
KRH43759	Soybean	nucleus	92.53	92.53
Solyc08g062920.2.1	Tomato	nucleus, plastid	90.87	92.51
KRH13696	Soybean	nucleus	92.41	92.41
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	84.34	92.34
VIT_19s0027g00760.t01	Wine grape	cytosol	93.0	91.91
CDY49975	Canola	cytosol	43.42	91.73
CDX90241	Canola	cytosol, extracellular	85.88	91.53
Bra010782.1-P	Field mustard	cytosol	91.1	91.1
AT1G56070.2	Thale cress	cytosol	91.1	91.1
CDY05533	Canola	cytosol	70.46	90.96
CDY32072	Canola	cytosol	69.51	90.57
CDY70516	Canola	cytosol	54.69	90.57
GSMUA_Achr4P01020_001	Banana	cytosol	93.36	90.56
Bra010781.1-P	Field mustard	cytosol	58.96	90.04
HORVU5Hr1G116710.1	Barley	cytosol	62.28	89.44
CDY70526	Canola	nucleus	8.9	88.24
CDY49974	Canola	nucleus	8.9	88.24
AT3G12915.2	Thale cress	cytosol	82.44	88.2
CDY24982	Canola	endoplasmic reticulum, vacuole	86.83	87.35
CDY40423	Canola	cytosol	81.49	87.29
Bra017279.1-P	Field mustard	cytosol	90.87	87.24
Bra020542.1-P	Field mustard	cytosol	90.98	81.16
KRH43761	Soybean	cytosol, nucleus, plastid	18.39	77.5
KRH13693	Soybean	mitochondrion	74.61	76.06
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	39.26	75.57
KRH13692	Soybean	cytosol, mitochondrion	59.91	70.63
CDY54261	Canola	nucleus	17.91	65.65
HORVU1Hr1G003960.9	Barley	cytosol	59.07	54.01
HORVU7Hr1G090710.6	Barley	plastid	37.84	32.22
HORVU5Hr1G092260.1	Barley	nucleus, plastid	33.81	24.44
HORVU2Hr1G092180.1	Barley	plastid	21.23	23.46
HORVU7Hr1G082910.2	Barley	mitochondrion	19.1	21.24
HORVU6Hr1G050160.1	Barley	plastid	12.69	20.07
HORVU3Hr1G072230.1	Barley	plastid	16.25	19.71
HORVU6Hr1G025110.1	Barley	plastid	12.46	19.66
HORVU1Hr1G009320.1	Barley	nucleus	20.76	19.57
HORVU7Hr1G019550.9	Barley	mitochondrion	15.3	19.31
HORVU6Hr1G025120.1	Barley	cytosol	1.78	13.89

Protein Annotations

MapMan:17.5.2.1	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
Gene3D:3.90.1430.10	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS
EnsemblPlantsGene:HORVU3Hr1G057890	EnsemblPlants:HORVU3Hr1G057890.1	InterPro:IPR000795	InterPro:IPR014721	UniProt:M0UYD9	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI000296DC9A

Description

No Description!

Coordinates

chrchr3H:+:435719772..435723079

Molecular Weight (calculated)

93967.9 Da

IEP (calculated)

6.119

GRAVY (calculated)

-0.212

Length

843 amino acids

Sequence
(BLAST)

001: MVKFTVEGLR IIMDKQNNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLFYE MTEESLRAYK GERDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDAKLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVDETKM MERLWGENFF DPSTKKWTNK STGSPTCKRG FVQFCYDPIK QIINTCMNDQ KDKLWPMLHK
301: LGVTMKTDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPSKAQKYR VENLYEGPLD DVYATAIRNC DPEGPLMLYV SKMIPASDKG RFFAFGRVFS
401: GRIATGMKVR IMGPNYVPGQ KKDLYMKSVQ RTVIWMGKKQ ESVEDVPCGN TVAMVGLDQY ITKNATLTNE KEVDACPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVLC SMEESGEHII AGAGELHLEI CLKDLQEDFM GGAEIIVSPP VVSFRETVLE KSCRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKVRSKVL SEEFGWDKDL AKKIWCFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGALAEE NMRGICFEVC DVVLHTDAIH
701: RGGGQVIPTA RRVIYASQLT AKPRLLEPVY LVEIQAPENA LGGIYGVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVIESFG FSSTLRAATS GQAFPQCVFD
801: HWDMMSADPL EAGSQAAQLV LDIRKRKGLK EQMTPLSEFE DKL

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.