Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G380500.1 | Wheat | cytosol | 86.79 | 96.84 |
| TraesCS5B01G373200.1 | Wheat | cytosol | 86.54 | 96.56 |
| TraesCS5A01G370800.1 | Wheat | cytosol | 86.36 | 96.36 |
| Os03t0650700-01 | Rice | cytosol | 73.16 | 82.9 |
| KXG37923 | Sorghum | cytosol | 70.58 | 78.76 |
| Zm00001d033505_P001 | Maize | cytosol | 70.5 | 78.74 |
| CDY10337 | Canola | cytosol | 26.59 | 65.4 |
| CDY10688 | Canola | cytosol | 46.91 | 62.73 |
| KRH40894 | Soybean | cytosol | 18.61 | 62.72 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 43.74 | 61.89 |
| KRG94823 | Soybean | cytosol | 53.69 | 61.25 |
| CDY32224 | Canola | cytosol | 27.02 | 61.16 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 53.26 | 60.29 |
| PGSC0003DMT400007735 | Potato | cytosol | 52.74 | 60.12 |
| Solyc11g071770.1.1 | Tomato | cytosol | 52.49 | 59.77 |
| AT3G22980.2 | Thale cress | cytosol | 51.89 | 59.61 |
| Bra033543.1-P | Field mustard | cytosol | 44.94 | 57.58 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 23.5 | 56.96 |
| CDY32225 | Canola | nucleus | 16.55 | 54.52 |
| HORVU1Hr1G009320.1 | Barley | nucleus | 37.65 | 49.11 |
| HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 24.53 | 33.93 |
| HORVU7Hr1G106150.1 | Barley | cytosol | 24.53 | 33.93 |
| HORVU3Hr1G057890.1 | Barley | cytosol | 24.44 | 33.81 |
| HORVU3Hr1G057880.1 | Barley | cytosol | 24.44 | 33.81 |
| HORVU5Hr1G116710.1 | Barley | cytosol | 16.04 | 31.86 |
| HORVU1Hr1G003960.9 | Barley | cytosol | 20.41 | 25.81 |
| HORVU7Hr1G090710.6 | Barley | plastid | 21.53 | 25.35 |
| HORVU7Hr1G082910.2 | Barley | mitochondrion | 13.46 | 20.71 |
| HORVU2Hr1G092180.1 | Barley | plastid | 13.04 | 19.92 |
| HORVU6Hr1G025110.1 | Barley | plastid | 9.09 | 19.85 |
| HORVU7Hr1G019550.9 | Barley | mitochondrion | 11.32 | 19.76 |
| HORVU6Hr1G050160.1 | Barley | plastid | 8.92 | 19.51 |
| HORVU3Hr1G072230.1 | Barley | plastid | 11.06 | 18.56 |
| HORVU6Hr1G025120.1 | Barley | cytosol | 1.11 | 12.04 |
Protein Annotations
| MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 |
| Gene3D:3.90.1430.10 | UniProt:A0A287S8N1 | InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| EnsemblPlantsGene:HORVU5Hr1G092260 | EnsemblPlants:HORVU5Hr1G092260.1 | InterPro:IPR000795 | InterPro:IPR014721 | InterPro:P-loop_NTPase | PFAM:PF00009 |
| PFAM:PF00679 | PFAM:PF03144 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 |
| InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54211 |
| SUPFAM:SSF54980 | InterPro:TF_GTP-bd_dom | InterPro:Transl_B-barrel_sf | UniParc:UPI000B484426 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:587938593..587942304
Molecular Weight (calculated)
126303.0 Da
IEP (calculated)
7.463
GRAVY (calculated)
-0.166
Length
1166 amino acids
Sequence
(BLAST)
(BLAST)
0001: PSEKSNRYLP LPLKLSVFPV KLPLGENRFG PLLLSSRDKS SFGPTRALGF LPAAXXXXXX XXXXXXXXXX XAAAAAPVRP LVPPPTPCHL PASRCPAAAC
0101: PLGPASLPYP TPTRRRRRLP CRLHARPPTA MAAADPRRVR NTCILAHVDH GKTTLADHLV ASCGDGLLHP RLAGRLRFMD YLDEEQRRAI TMKSAAVLLR
0201: YGDGPSAHRV NLIDSPGHID FCSEVSSAAR LSDSALILVD AVEGVHIQTH AALRQAFLER LRPCLVLNKL DRLVTELHLT PAEAYTRLHR ILADVNSIYS
0301: ALRSHSYFSV LASLEDQPSS SSSASQDDLP DDADDDEEDA FQPQKGNVVF ACALDGWGFR IHHFAELYAT KLGASASALL RGFWGPRYLE KKVDKKGKKN
0401: FMIVGKKAVE GTDREPMFVE FILKPLWKLY EGVLGQDGEI VQKVISNFKL NIPQRELQNK DPKLVLQSVM SRWLPLADAV MAMVVECTPD PVVAQGARVA
0501: RLMPKRELAT EDAAGCAEVV LEAERVRRCV ETCDAAADSP VVVYVSKMFA VPCKMLPPKG AHGELLTHQD ASESEECFMA FARVFSGVLR AGQKIFVLSA
0601: LYDPLKGDAV QKHVQEIELQ YLYEMLGQGL RPVTSVSAGN VVAIQGLGQH ILKSATLSST KNCWPFSSMM FQVSPMLRVA IEPANPTDLG ALIKGIKLLN
0701: RADPFVEYTV SHRGEHILAA AGEVHLERCK KDLEERFAKV KLVVSDPLVS FKETVEGEGA ALLEGLKAPH AFVERTTPNG RCTVRVQVLR LPNALTKVLQ
0801: ESDQLLGQIM EGKNRNVMLN PQISQDDCDS VAMLRQRMVS AIDSELEAIS EQVDKEKLQK YRKTWLGYLK RIWSLGPWQV GPNFLLLPDV ESSDGVLTME
0901: DGRQGILVRG RADFSERLGF VSGSDAEANH TPDSSKSSAD TPESLHLESV ALRNSILSGF QFATNAGPLC DEPMWGLAFI IEPYIFADNS DAAHQSDQYN
1001: IFSGQVITAV KEGCRAAVLQ NNPRLVEGMY FCELTTPTQQ LGSTYAVLSK RRAKILKEEM QEGTSVFTVH AYLPVAESIG FSNQLRTLTS GAASALLVLS
1101: HWDAIQEDPF FIPKSQEEIE EFGDGASIGP NLAKKLMNSV RRRKGLHVEE KVVEHGTKQR TLSKKA
0101: PLGPASLPYP TPTRRRRRLP CRLHARPPTA MAAADPRRVR NTCILAHVDH GKTTLADHLV ASCGDGLLHP RLAGRLRFMD YLDEEQRRAI TMKSAAVLLR
0201: YGDGPSAHRV NLIDSPGHID FCSEVSSAAR LSDSALILVD AVEGVHIQTH AALRQAFLER LRPCLVLNKL DRLVTELHLT PAEAYTRLHR ILADVNSIYS
0301: ALRSHSYFSV LASLEDQPSS SSSASQDDLP DDADDDEEDA FQPQKGNVVF ACALDGWGFR IHHFAELYAT KLGASASALL RGFWGPRYLE KKVDKKGKKN
0401: FMIVGKKAVE GTDREPMFVE FILKPLWKLY EGVLGQDGEI VQKVISNFKL NIPQRELQNK DPKLVLQSVM SRWLPLADAV MAMVVECTPD PVVAQGARVA
0501: RLMPKRELAT EDAAGCAEVV LEAERVRRCV ETCDAAADSP VVVYVSKMFA VPCKMLPPKG AHGELLTHQD ASESEECFMA FARVFSGVLR AGQKIFVLSA
0601: LYDPLKGDAV QKHVQEIELQ YLYEMLGQGL RPVTSVSAGN VVAIQGLGQH ILKSATLSST KNCWPFSSMM FQVSPMLRVA IEPANPTDLG ALIKGIKLLN
0701: RADPFVEYTV SHRGEHILAA AGEVHLERCK KDLEERFAKV KLVVSDPLVS FKETVEGEGA ALLEGLKAPH AFVERTTPNG RCTVRVQVLR LPNALTKVLQ
0801: ESDQLLGQIM EGKNRNVMLN PQISQDDCDS VAMLRQRMVS AIDSELEAIS EQVDKEKLQK YRKTWLGYLK RIWSLGPWQV GPNFLLLPDV ESSDGVLTME
0901: DGRQGILVRG RADFSERLGF VSGSDAEANH TPDSSKSSAD TPESLHLESV ALRNSILSGF QFATNAGPLC DEPMWGLAFI IEPYIFADNS DAAHQSDQYN
1001: IFSGQVITAV KEGCRAAVLQ NNPRLVEGMY FCELTTPTQQ LGSTYAVLSK RRAKILKEEM QEGTSVFTVH AYLPVAESIG FSNQLRTLTS GAASALLVLS
1101: HWDAIQEDPF FIPKSQEEIE EFGDGASIGP NLAKKLMNSV RRRKGLHVEE KVVEHGTKQR TLSKKA
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.