Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10337 | Canola | cytosol | 52.75 | 97.05 |
| CDY32224 | Canola | cytosol | 54.93 | 93.01 |
| AT3G22980.2 | Thale cress | cytosol | 92.66 | 79.61 |
| CDY32225 | Canola | nucleus | 31.31 | 77.12 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 42.2 | 76.51 |
| KRH40894 | Soybean | cytosol | 25.8 | 65.03 |
| Solyc11g071770.1.1 | Tomato | cytosol | 74.66 | 63.57 |
| PGSC0003DMT400007735 | Potato | cytosol | 74.31 | 63.34 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 74.54 | 63.11 |
| KRG94823 | Soybean | cytosol | 72.94 | 62.23 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 56.08 | 59.34 |
| Os03t0650700-01 | Rice | cytosol | 62.96 | 53.35 |
| TraesCS5B01G373200.1 | Wheat | cytosol | 63.42 | 52.92 |
| TraesCS5D01G380500.1 | Wheat | cytosol | 63.3 | 52.82 |
| TraesCS5A01G370800.1 | Wheat | cytosol | 63.3 | 52.82 |
| Zm00001d033505_P001 | Maize | cytosol | 62.61 | 52.3 |
| KXG37923 | Sorghum | cytosol | 62.61 | 52.25 |
| Os02t0543300-00 | Rice | mitochondrion | 55.5 | 48.16 |
| HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 62.73 | 46.91 |
| KXG30393 | Sorghum | nucleus | 46.67 | 46.15 |
| TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 51.03 | 44.95 |
| TraesCS1B01G062700.1 | Wheat | cytosol | 51.38 | 44.53 |
| TraesCS1D01G049600.1 | Wheat | cytosol | 47.48 | 43.22 |
| CDY70526 | Canola | nucleus | 3.67 | 37.65 |
| CDY49975 | Canola | cytosol | 16.97 | 37.09 |
| CDY49974 | Canola | nucleus | 3.56 | 36.47 |
| HORVU1Hr1G009320.1 | Barley | nucleus | 35.32 | 34.45 |
| CDX90241 | Canola | cytosol, extracellular | 30.73 | 33.88 |
| CDY24982 | Canola | endoplasmic reticulum, vacuole | 30.96 | 32.22 |
| CDY40423 | Canola | cytosol | 28.78 | 31.89 |
| CDY70516 | Canola | cytosol | 18.23 | 31.24 |
| CDY05533 | Canola | cytosol | 23.28 | 31.09 |
| CDY32072 | Canola | cytosol | 23.05 | 31.07 |
| CDY15566 | Canola | cytosol | 25.11 | 26.29 |
| CDY70689 | Canola | cytosol | 15.71 | 25.32 |
| CDY54261 | Canola | nucleus | 6.65 | 25.22 |
| CDY71233 | Canola | mitochondrion, nucleus | 15.94 | 24.91 |
| CDY09982 | Canola | nucleus | 26.26 | 23.15 |
| CDY69302 | Canola | cytosol | 7.34 | 20.06 |
| CDY31838 | Canola | plastid | 17.66 | 19.87 |
| CDY46917 | Canola | plastid | 17.66 | 19.87 |
| CDX74705 | Canola | plastid | 16.63 | 19.21 |
| CDY18957 | Canola | plastid | 16.63 | 19.18 |
| CDY65319 | Canola | endoplasmic reticulum, plastid, vacuole | 14.56 | 18.46 |
| CDX67441 | Canola | plastid | 14.45 | 18.37 |
| CDX84803 | Canola | mitochondrion | 13.07 | 18.27 |
| CDY44781 | Canola | plastid | 13.99 | 18.07 |
| CDY40739 | Canola | plastid | 13.88 | 17.69 |
| CDY54484 | Canola | mitochondrion | 13.53 | 17.64 |
| CDY19061 | Canola | mitochondrion | 13.53 | 17.64 |
| CDY65992 | Canola | plastid | 12.96 | 16.77 |
| CDY09816 | Canola | plastid | 12.96 | 16.74 |
| CDX91105 | Canola | plastid | 12.84 | 16.62 |
| CDX85635 | Canola | plastid | 12.96 | 15.96 |
| CDX78349 | Canola | cytosol | 3.44 | 12.99 |
| CDY23967 | Canola | cytosol | 1.15 | 8.62 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 | MapMan:35.1 |
| GO:A0A078FF19 | UniProt:A0A078FF19 | EnsemblPlants:CDY10688 | ProteinID:CDY10688 | ProteinID:CDY10688.1 | InterPro:EFG_III/V |
| InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00048466001 | InterPro:IPR000795 | InterPro:IPR014721 |
| InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PRINTS:PR00315 | PFscan:PS51722 |
| PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 | SUPFAM:SSF50447 |
| SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | TIGRFAMs:TIGR00231 |
| InterPro:Transl_B-barrel_sf | UniParc:UPI0004EE52C5 | SEG:seg | : | : | : |
Description
BnaA05g16740DBnaA05g16740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF19]
Coordinates
chrLK032005:-:766615..770377
Molecular Weight (calculated)
96541.9 Da
IEP (calculated)
5.425
GRAVY (calculated)
-0.160
Length
872 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESDGRKIR NICILAHVDH GKTTLADHLI ASSGDGELLK PRLAGKVRYM DYLDEEQRRA ITMKSSSISL RYKDYSLNLI DSPGHMDFCS EVSTAARLSD
101: GALVLVDAVE GVHIQTHAVL RQAWIEKLTP CLVLNKIDRL ICELRLSPME AYTRLIRIVH EVNGIVSAYK SEKYLSDVDS ILASPSGEIT DESLELLEDD
201: EEVTFQPQKG NVVFVCALDG WGFGVSEFAN FYASKLGAKA ETLQKSLWGP RYYIPKTKMI VGKKSYAGSK IKPMFVQFVL EPLWEVYEAA LDPGMMSRWL
301: PLSDAVLSMA VKHLPDPISA QAYRIPRLVP ERKVIGGNDA DSSVLAEAEH VRRSIEACDS SRDSPCVVFV SKMFAMPMKM IPLGGDHRER MNGLNDDDSK
401: SESDECFLAF ARIFSGVLRA GQRVFVISAL YDPLKGESSQ KYIQEAELHS IYLMMGQGLK PVNEVKAGNV VAIRGLGPYI SKSATLSSTR NCWPLASMEF
501: QVSPTLRVAI EPSDPSDMSA LMKGLRLLNR ADPFVEITVS ARGEHVLAAA GEVHLERCIK DLTDRFARVN IEVSSPLVSY RETIEGDGSN LLEIHVMKLP
601: HSLTKLLDES TDLLDGKRIC EDGSILVRGS PHVSHRLGFT EDPTETPSDS ALYSEAVTLE SSIVSGFQLA TASGPLCDEP MWGLAFTIES HLAQDSETEK
701: QPENFGIFTG QVMTAVKDAC RAAVLQTNPR IVEAMYFCEL NTAPEYLGPM YAVLSRRRAR VLKEEMQEGS SLFTVHAYVP VSESFGFADE LRKGTSGGAS
801: ALMVLSHWEM LEEDPFFVPK TEEEIEEFGD GASVLPNTAR KLINAVRRRK GLHVEEKVVQ HATKQRTLAR KV
101: GALVLVDAVE GVHIQTHAVL RQAWIEKLTP CLVLNKIDRL ICELRLSPME AYTRLIRIVH EVNGIVSAYK SEKYLSDVDS ILASPSGEIT DESLELLEDD
201: EEVTFQPQKG NVVFVCALDG WGFGVSEFAN FYASKLGAKA ETLQKSLWGP RYYIPKTKMI VGKKSYAGSK IKPMFVQFVL EPLWEVYEAA LDPGMMSRWL
301: PLSDAVLSMA VKHLPDPISA QAYRIPRLVP ERKVIGGNDA DSSVLAEAEH VRRSIEACDS SRDSPCVVFV SKMFAMPMKM IPLGGDHRER MNGLNDDDSK
401: SESDECFLAF ARIFSGVLRA GQRVFVISAL YDPLKGESSQ KYIQEAELHS IYLMMGQGLK PVNEVKAGNV VAIRGLGPYI SKSATLSSTR NCWPLASMEF
501: QVSPTLRVAI EPSDPSDMSA LMKGLRLLNR ADPFVEITVS ARGEHVLAAA GEVHLERCIK DLTDRFARVN IEVSSPLVSY RETIEGDGSN LLEIHVMKLP
601: HSLTKLLDES TDLLDGKRIC EDGSILVRGS PHVSHRLGFT EDPTETPSDS ALYSEAVTLE SSIVSGFQLA TASGPLCDEP MWGLAFTIES HLAQDSETEK
701: QPENFGIFTG QVMTAVKDAC RAAVLQTNPR IVEAMYFCEL NTAPEYLGPM YAVLSRRRAR VLKEEMQEGS SLFTVHAYVP VSESFGFADE LRKGTSGGAS
801: ALMVLSHWEM LEEDPFFVPK TEEEIEEFGD GASVLPNTAR KLINAVRRRK GLHVEEKVVQ HATKQRTLAR KV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.