Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G062700.1 | Wheat | cytosol | 95.56 | 94.04 |
| TraesCS1D01G049600.1 | Wheat | cytosol | 90.0 | 93.01 |
| HORVU1Hr1G009320.1 | Barley | nucleus | 71.01 | 78.64 |
| KXG30393 | Sorghum | nucleus | 53.33 | 59.86 |
| TraesCS5A01G370800.1 | Wheat | cytosol | 62.12 | 58.85 |
| Os02t0543300-00 | Rice | mitochondrion | 58.38 | 57.51 |
| CDY10337 | Canola | cytosol | 25.35 | 52.95 |
| CDY10688 | Canola | cytosol | 44.95 | 51.03 |
| KRG94823 | Soybean | cytosol | 51.62 | 50.0 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 52.02 | 50.0 |
| Solyc11g071770.1.1 | Tomato | cytosol | 51.62 | 49.9 |
| PGSC0003DMT400007735 | Potato | cytosol | 51.52 | 49.85 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 41.11 | 49.39 |
| AT3G22980.2 | Thale cress | cytosol | 50.3 | 49.06 |
| CDY32224 | Canola | cytosol | 25.25 | 48.54 |
| KRH40894 | Soybean | cytosol | 16.87 | 48.27 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 22.73 | 46.78 |
| Bra033543.1-P | Field mustard | cytosol | 42.63 | 46.37 |
| CDY32225 | Canola | nucleus | 16.16 | 45.2 |
| TraesCS6A01G189500.1 | Wheat | cytosol, nucleus, plastid | 4.95 | 39.2 |
| TraesCS2A01G234500.1 | Wheat | cytosol | 4.85 | 38.4 |
| TraesCS7A01G288600.1 | Wheat | cytosol | 4.55 | 36.89 |
| TraesCS4A01G363700.1 | Wheat | cytosol, golgi, unclear | 26.46 | 31.08 |
| TraesCS7A01G461100.1 | Wheat | cytosol, nucleus, unclear | 26.46 | 31.08 |
| TraesCS4A01G363800.1 | Wheat | cytosol, nucleus, plastid | 26.36 | 30.96 |
| TraesCS3A01G232300.1 | Wheat | cytosol, golgi | 26.26 | 30.84 |
| TraesCS4A01G363900.1 | Wheat | plastid | 18.48 | 27.85 |
| TraesCS1A01G027600.1 | Wheat | cytosol | 23.03 | 26.98 |
| TraesCS7A01G380300.1 | Wheat | nucleus | 23.84 | 23.74 |
| TraesCS2A01G387000.1 | Wheat | mitochondrion, plastid | 15.56 | 20.05 |
| TraesCS3A01G291600.1 | Wheat | mitochondrion | 13.43 | 19.76 |
| TraesCS7A01G336600.4 | Wheat | mitochondrion | 14.24 | 18.08 |
| TraesCS4A01G386100.3 | Wheat | mitochondrion | 12.12 | 18.02 |
| TraesCS7A01G087200.1 | Wheat | mitochondrion | 11.92 | 17.72 |
| TraesCS6A01G192800.1 | Wheat | plastid | 11.82 | 17.36 |
| TraesCS6A01G130900.1 | Wheat | plastid | 11.31 | 16.72 |
Protein Annotations
| MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 |
| Gene3D:3.90.1430.10 | ncoils:Coil | InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| InterPro:IPR000795 | InterPro:IPR014721 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 |
| PFAM:PF14492 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold |
| InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 |
| InterPro:TF_GTP-bd_dom | EnsemblPlantsGene:TraesCS1A01G048300 | EnsemblPlants:TraesCS1A01G048300.1 | InterPro:Transl_B-barrel_sf | TIGR:cd01681 | TIGR:cd04096 |
| TIGR:cd16268 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:30117845..30120854
Molecular Weight (calculated)
108511.0 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.144
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAAAGDPR RVRNTCIMAH VDHGKTTLAD HLVAFGGGGL LNPSMAGKAR FMDHLQEEQE RAITMKSASV LLRHRDGTRV HLIDSPGHAD FCSEVSAAAR
101: VADSALIVVD AVDGLGVQTH AALRKAFAER LRPCLVLNKL DRLITDLRLD PGEAYERLRR IVAEANSVYS TLRSGSYFSL LDGLAPDQQA DDGEDTFVPQ
201: KGNVVFGCAR DGWGFRIQDF AAVMAMGRAG QANKLEKKKA MPLANGIKQR PIFVELVLKR LWKVYDHGLK VDGASWLRDH VVQAFNLKVS ERELQSKDRP
301: KAVLEAVMRA WLPLAETVMT MIVECTPDPV AAQRFRAPAL MPERELPTWV LAEHVAEAEK VRRCVVACSA SSSAPVVVFV SKMFVVKHKD LPPTLDRGQE
401: AAGEPEECFL AFARVFSGVL HAGQKVFVLS PMYDPVKGDT TGKHLKEVEV QQLYEMLGEG LRPVASVGAG NVAAIKGLGE HIMKTATLSS TRNCWPFASM
501: AFQVSPILKV AIEPANVADL AAFREGLSLL NRADPLVEYS ISEKGEHVLA AAGKVHLEHC VENLRERFAK VELNVSEPLV SFKETIQGEG VGLVDSLKDP
601: QGYVERIAPD GKFAVRVKVI RLPDALVKVL EENEELLSRT IKGQTARSDR AMGSQCPRDD DGRSVAVLRQ DMLSAVESEL EALSVRADEV KLEWYRKTLL
701: GYLHKISALG PSQVGPNLLL MPGVKLSSGS TTIQNGREGI LVRGTCHVSE KLGFVSVSDD AEISNGIIDD SEPSTDVPDH EALRNIIISG FQEVTNAGPL
801: CDEPMWGLAF IVEPYIFSGS PDSVNCSYQH RAAVREACRA AVLQSKPRLV EPMYLCEVTT PIERLGSVYS VLGDCRAKVQ EAEMQLETFL YMVHAHLPVA
901: ESSEFSEKLW NGSSGAATAR LTFSHWEAIP QDPFFVPKTK EEIEEFGDGS NMGPNLAKKL IDSVRRRKGL HVDDKVVKHG TKQRTRAKKV
101: VADSALIVVD AVDGLGVQTH AALRKAFAER LRPCLVLNKL DRLITDLRLD PGEAYERLRR IVAEANSVYS TLRSGSYFSL LDGLAPDQQA DDGEDTFVPQ
201: KGNVVFGCAR DGWGFRIQDF AAVMAMGRAG QANKLEKKKA MPLANGIKQR PIFVELVLKR LWKVYDHGLK VDGASWLRDH VVQAFNLKVS ERELQSKDRP
301: KAVLEAVMRA WLPLAETVMT MIVECTPDPV AAQRFRAPAL MPERELPTWV LAEHVAEAEK VRRCVVACSA SSSAPVVVFV SKMFVVKHKD LPPTLDRGQE
401: AAGEPEECFL AFARVFSGVL HAGQKVFVLS PMYDPVKGDT TGKHLKEVEV QQLYEMLGEG LRPVASVGAG NVAAIKGLGE HIMKTATLSS TRNCWPFASM
501: AFQVSPILKV AIEPANVADL AAFREGLSLL NRADPLVEYS ISEKGEHVLA AAGKVHLEHC VENLRERFAK VELNVSEPLV SFKETIQGEG VGLVDSLKDP
601: QGYVERIAPD GKFAVRVKVI RLPDALVKVL EENEELLSRT IKGQTARSDR AMGSQCPRDD DGRSVAVLRQ DMLSAVESEL EALSVRADEV KLEWYRKTLL
701: GYLHKISALG PSQVGPNLLL MPGVKLSSGS TTIQNGREGI LVRGTCHVSE KLGFVSVSDD AEISNGIIDD SEPSTDVPDH EALRNIIISG FQEVTNAGPL
801: CDEPMWGLAF IVEPYIFSGS PDSVNCSYQH RAAVREACRA AVLQSKPRLV EPMYLCEVTT PIERLGSVYS VLGDCRAKVQ EAEMQLETFL YMVHAHLPVA
901: ESSEFSEKLW NGSSGAATAR LTFSHWEAIP QDPFFVPKTK EEIEEFGDGS NMGPNLAKKL IDSVRRRKGL HVDDKVVKHG TKQRTRAKKV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.