Factsheet for TraesCS7A01G336600.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G344300.4	Wheat	mitochondrion	99.62	99.62
TraesCS7B01G248200.1	Wheat	mitochondrion	93.21	95.91
HORVU7Hr1G082910.2	Barley	mitochondrion	92.69	95.38
Os03t0565500-01	Rice	mitochondrion	87.82	90.49
Zm00001d034826_P001	Maize	mitochondrion, plastid	85.9	88.98
EER90530	Sorghum	mitochondrion, plastid	86.15	88.65
GSMUA_Achr10P...	Banana	cytosol	76.15	85.71
KRG88956	Soybean	mitochondrion	71.15	79.63
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	75.38	78.82
AT2G45030.1	Thale cress	mitochondrion	74.62	77.19
Bra004884.1-P	Field mustard	plastid	74.23	76.69
CDX74705	Canola	plastid	74.23	76.69
AT1G45332.1	Thale cress	mitochondrion	73.97	76.53
CDY18957	Canola	plastid	74.1	76.45
Solyc01g090690.2.1	Tomato	plastid	73.08	75.0
PGSC0003DMT400066962	Potato	mitochondrion	72.69	74.61
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	40.0	40.62
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	3.33	20.8
TraesCS2A01G234500.1	Wheat	cytosol	3.33	20.8
TraesCS7A01G288600.1	Wheat	cytosol	3.21	20.49
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	20.64	19.1
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	20.64	19.1
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	20.64	19.1
TraesCS6A01G130900.1	Wheat	plastid	16.28	18.96
TraesCS4A01G386100.3	Wheat	mitochondrion	16.03	18.77
TraesCS3A01G232300.1	Wheat	cytosol, golgi	20.26	18.74
TraesCS7A01G087200.1	Wheat	mitochondrion	15.77	18.47
TraesCS6A01G192800.1	Wheat	plastid	15.77	18.25
TraesCS3A01G291600.1	Wheat	mitochondrion	15.64	18.13
TraesCS1A01G027600.1	Wheat	cytosol	18.59	17.16
TraesCS7A01G380300.1	Wheat	nucleus	19.23	15.09
TraesCS4A01G363900.1	Wheat	plastid	12.69	15.07
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	18.08	14.24
TraesCS5A01G370800.1	Wheat	cytosol	18.72	13.97

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006414
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	HAMAP:MF_00054_B	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	EnsemblPlantsGene:TraesCS7A01G336600	EnsemblPlants:TraesCS7A01G336600.4
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	TIGR:cd01434	TIGR:cd01886	TIGR:cd04091
TIGR:cd16262	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:492643516..492660319

Molecular Weight (calculated)

86442.8 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.208

Length

780 amino acids

Sequence
(BLAST)

001: MAMARRSASH LLSSFRPFSL LLQPLADAPS PAAAAAAASA RRAMSSASAL RARGDDKELA RWRESMDRMR NIGISAHIDS GKTTLTERVL YYTGRIHEIH
101: EVRGRDGVGA KMDSMDLERE KGITIQSAAT YCTWNGYQIN IIDTPGHVDF TVEVERALRV LDGAILVLCS VGGVQSQSIT VDRQMKRYEI PRVAFINKLD
201: RMGADPWKVL NQARAKLRHQ SAAVQVPIGL EEEFEGLVDL VELKALKFEG GSGQEVVTSD VPSNMQDFVM DKRRELIEVV SEVDDQLAEA FLNDEPITAN
301: ELKAAIRRAT VARKFIPVYM GSAFKNKGVQ PLLNGVLDYL PCPLEVENFA LDQNKSEEKV SLSGTPAGPL VALAFKLEEG RFGQLTYLRI YEGVIRKGDF
401: IQNVNTGKKI KVPRLVRMHS NEMEDIQEAH AGQIVAVFGV DCSSGDTFTD GSVKYTMTSM HVAEPVMSLA VNPISKDSGG QFSKALNRFQ REDPTFRVGL
501: DPESGQTIIS GMGELHLDIY VERIRREYKV DAKVGKPRVN FRESITQRAE FDYLHKKQSG GQGQYGRVCG YIEPLPSDAE GKFEFDNMII GQAIPSNFIP
601: AIEKGFKEAC NSGSLIGHPV ENIRITLTDG ASHQVDSSEL AFKLAAIYAF RQCYTAAKPV ILEPVMKVEL KFPTEFQGTV TGDINKRKGI IVGNDQEGDD
701: TVVVCHVPLN NMFGYSTALR SMTQSAAAMF CYRSIDILLH AWVIPAIWEE IRTCISWRLR ASINIQSFIT MGNITSYTRN

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.