Factsheet for PGSC0003DMT400066962

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g090690.2.1	Tomato	plastid	98.82	98.82
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	84.47	86.06
GSMUA_Achr10P...	Banana	cytosol	77.63	85.14
KRG88956	Soybean	mitochondrion	77.5	84.5
AT2G45030.1	Thale cress	mitochondrion	81.45	82.1
AT1G45332.1	Thale cress	mitochondrion	81.45	82.1
CDY18957	Canola	plastid	80.53	80.95
Bra004884.1-P	Field mustard	plastid	80.39	80.93
CDX74705	Canola	plastid	80.13	80.66
Os03t0565500-01	Rice	mitochondrion	78.55	78.86
EER90530	Sorghum	mitochondrion, plastid	78.42	78.63
Zm00001d034826_P001	Maize	mitochondrion, plastid	77.37	78.09
TraesCS7B01G248200.1	Wheat	mitochondrion	76.71	76.91
HORVU7Hr1G082910.2	Barley	mitochondrion	76.71	76.91
TraesCS7A01G336600.4	Wheat	mitochondrion	74.61	72.69
TraesCS7D01G344300.4	Wheat	mitochondrion	74.61	72.69
PGSC0003DMT400012076	Potato	cytosol, plastid	42.24	40.79
PGSC0003DMT400070154	Potato	plastid	17.11	19.06
PGSC0003DMT400024321	Potato	mitochondrion	15.79	18.02
PGSC0003DMT400034344	Potato	mitochondrion	15.39	17.75
PGSC0003DMT400007735	Potato	cytosol	20.92	15.54
PGSC0003DMT400078978	Potato	cytosol	20.0	15.4

Protein Annotations

EntrezGene:102586599	MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870
Gene3D:3.40.50.300	InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	UniProt:M1CGG0	HAMAP:MF_00054_B	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	EnsemblPlantsGene:PGSC0003DMG400026030
PGSC:PGSC0003DMG400026030	EnsemblPlants:PGSC0003DMT400066962	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636
PANTHER:PTHR43636:SF2	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI000296AAFF	RefSeq:XP_006347922.1
SEG:seg	:	:	:	:	:

Description

Mitochondrial elongation factor [Source:PGSC_GENE;Acc:PGSC0003DMG400026030]

Coordinates

chr1:+:69890544..69903140

Molecular Weight (calculated)

84071.3 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.317

Length

760 amino acids

Sequence
(BLAST)

001: MARSARSSTT RLFYTLCSST KRTPLTPQHP PPTPVAALLA GNFQLRHYAA GSATARVREE KDAVWRESLE KVRNIGISAH IDSGKTTLTE RVLFYTGRIH
101: EIHEVRGKDG VGAKMDSMDL EREKGITIQS AATYCTWKDY QVNIIDTPGH VDFTIEVERA LRVLDGAILV LCSVGGVQSQ SITVDRQMRR YDVPRLAFIN
201: KLDRMGADPW KVLNQARSKL RHHSAAVQVP IGLEDDFKGL IDLVQSKAYY FHGSNGEKIV TEDIPADMEA ITSEKRRELI EAVSEVDDKL AESFLNDEPI
301: SSADLEAAIR RATIARKFVP FFMGSAFKNK GVQTLLDGVL SYLPCPVEVS NYALDQTKDE EKVTLTGNPS GPLVALAFKL EEGRFGQLTY LRIYEGVIRK
401: GDFIINVNTG KKIKIPRLVR MHSNEMEDIQ EAHAGQIVAV FGVDCASGDT FTDGSVKYTM TSMNVPEPVM SLAVSPVSKD SGGQFSKALN RFQKEDPTFR
501: VGLDAESGET IISGMGELHL DIYVERIRRE YKVEAQVGKP RVNFRETITK RADFDYLHKK QSGGQGQYGR VIGYVEPLEP GSGSKFEFEN MLVGQTVPSN
601: YVPAIEKGFR EAANSGSLIG HPVENIRVVL TDGASHNVDS SELAFKLASI YAFRQCYTAA KPIILEPVML VDIKVPTEFQ GTVTGDINKR KGVIIGNDQE
701: GDDSVITANV PLNMMFGYST SLRSMTQGKG EFTMEYREHA PVSGDTQTQL VNTYKASKES

Best Arabidopsis Sequence Match ( AT2G45030.1 )
(BLAST)

001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG2Elongation factor G-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IW10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.