Factsheet for Os03t0565500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034826_P001	Maize	mitochondrion, plastid	93.13	93.63
EER90530	Sorghum	mitochondrion, plastid	93.53	93.4
TraesCS7B01G248200.1	Wheat	mitochondrion	92.73	92.61
HORVU7Hr1G082910.2	Barley	mitochondrion	92.6	92.48
GSMUA_Achr10P...	Banana	cytosol	82.03	89.61
TraesCS7D01G344300.4	Wheat	mitochondrion	90.49	87.82
TraesCS7A01G336600.4	Wheat	mitochondrion	90.49	87.82
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	81.37	82.57
KRG88956	Soybean	mitochondrion	75.43	81.92
AT2G45030.1	Thale cress	mitochondrion	80.32	80.64
AT1G45332.1	Thale cress	mitochondrion	80.05	80.37
CDX74705	Canola	plastid	79.52	79.74
Bra004884.1-P	Field mustard	plastid	79.39	79.6
CDY18957	Canola	plastid	79.26	79.37
Solyc01g090690.2.1	Tomato	plastid	79.13	78.82
PGSC0003DMT400066962	Potato	mitochondrion	78.86	78.55
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	10.83	58.16
Os04t0538100-01	Rice	plasma membrane	21.0	41.19
Os01t0742200-01	Rice	cytosol, nucleus	20.87	19.13
Os01t0723000-01	Rice	cytosol, nucleus, plasma membrane	21.53	19.11
Os01t0752700-01	Rice	mitochondrion	16.38	18.43
Os06t0144800-01	Rice	mitochondrion	15.98	18.25
Os02t0285800-01	Rice	plasma membrane	15.98	18.09
Os02t0543300-00	Rice	mitochondrion	19.55	14.73
Os03t0650700-01	Rice	cytosol	19.95	14.67
Os06t0608300-01	Rice	nucleus	19.29	14.64
Os05t0467501-00	Rice	cytosol	8.06	13.38

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
EntrezGene:4333268	ProteinID:AAK50578.1	ProteinID:AAK53868.1	EMBL:AB040051	ProteinID:ABF97151.1	ProteinID:BAB13515.1
ProteinID:BAF12415.1	ProteinID:BAS84953.1	InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0070125	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	HAMAP:MF_00054_B	EnsemblPlantsGene:Os03g0565500
EnsemblPlants:Os03t0565500-01	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764
PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2
UniProt:Q9FE64	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI000016D8FD	RefSeq:XP_015631992.1
SEG:seg	:	:	:	:	:

Description

mitochondrial elongation factor GSimilar to Elongation factor G 1, mitochondrial precursor (mEF-G-1) (EFGM). (Os03t0565500-01)

Coordinates

chr3:+:20403051..20417506

Molecular Weight (calculated)

83929.5 Da

IEP (calculated)

6.194

GRAVY (calculated)

-0.287

Length

757 amino acids

Sequence
(BLAST)

001: MAMARRSASR LLSSFRPFSL LLQPLDDAPS LSAAAAAASA RRGMSSASAL RARDEKEVAR WRESMDRMRN IGISAHIDSG KTTLTERVLY YTGRIHEIHE
101: VRGRDGVGAK MDSMDLEREK GITIQSAATY CTWNGYQVNI IDTPGHVDFT IEVERALRVL DGAILVLCSV GGVQSQSITV DRQMRRYEIP RVAFINKLDR
201: MGADPWKVLN QARSKLRHHN AAVQVPIGLE EEFEGLVDLV ELKAYKFEGG SGQNVVASDV PSNMQDLVME KRRELIEVVS EVDDQLAEAF LNDEPIQANQ
301: LKAAIRRATV ARKFIPVYMG SAFKNKGVQP LLDGVLDYLP CPMEVESYAL DQNKSEEKVL LAGTPAEPLV ALAFKLEEGR FGQLTYLRIY DGVIRKGDFI
401: YNVNTGKKIK VPRLVRMHSN EMEDIQEAHA GQIVAVFGVD CASGDTFTDG SVKYTMTSMN VPEPVMSLAV SPISKDSGGQ FSKALNRFQK EDPTFRVGLD
501: PESGETIISG MGELHLDIYV ERIRREYKVD AKVGKPRVNF RETITQRAEF DYLHKKQSGG QGQYGRVCGY IEPLPSESDG KFEFDNMIIG QAIPSNFIPA
601: IEKGFKEACN SGSLIGHPVE NIRIVLTDGA SHAVDSSELA FKLASIYAFR QCYAAARPVI LEPVMKVELK VPTEFQGTVT GDMNKRKGII VGNDQEGDDT
701: VVVCHVPLNN MFGYSTALRS MTQGKGEFSM EYLEHNTVSQ DVQMQLVNTY KASRGTE

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.