Factsheet for Os06t0144800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89181	Sorghum	mitochondrion	92.61	92.33
TraesCS4A01G386100.3	Wheat	mitochondrion	91.25	90.84
HORVU7Hr1G019550.9	Barley	mitochondrion	91.25	90.57
TraesCS7D01G081700.2	Wheat	mitochondrion	90.8	90.39
Zm00001d000213_P001	Maize	mitochondrion	92.31	90.0
TraesCS7A01G087200.1	Wheat	mitochondrion	90.2	89.79
GSMUA_Achr10P...	Banana	mitochondrion	82.05	80.59
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	81.0	78.85
PGSC0003DMT400034344	Potato	mitochondrion	77.68	78.15
Solyc03g058880.2.1	Tomato	mitochondrion	77.53	77.88
KRH40434	Soybean	mitochondrion	77.53	76.15
Bra028444.1-P	Field mustard	mitochondrion	74.66	74.89
AT5G39900.1	Thale cress	mitochondrion	74.06	74.06
CDX67441	Canola	plastid	74.66	72.16
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	74.21	71.51
KRH00796	Soybean	nucleus	49.92	50.38
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	7.09	33.33
Os02t0285800-01	Rice	plasma membrane	23.23	23.02
Os01t0752700-01	Rice	mitochondrion	22.62	22.29
Os03t0565500-01	Rice	mitochondrion	18.25	15.98
Os01t0742200-01	Rice	cytosol, nucleus	19.16	15.38
Os01t0723000-01	Rice	cytosol, nucleus, plasma membrane	19.16	14.89
Os04t0538100-01	Rice	plasma membrane	7.99	13.73
Os03t0650700-01	Rice	cytosol	19.31	12.44
Os06t0608300-01	Rice	nucleus	17.19	11.43
Os02t0543300-00	Rice	mitochondrion	17.19	11.34
Os05t0467501-00	Rice	cytosol	7.09	10.31

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:4340102	ProteinID:BAD68406.1	ProteinID:BAF18697.1	ProteinID:BAS96126.1	ProteinID:EEE65074.1	InterPro:EF-4
InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV
HAMAP:MF_00071	EnsemblPlantsGene:Os06g0144800	EnsemblPlants:Os06t0144800-01	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512	PANTHER:PTHR43512:SF3
UniProt:Q5VQ69	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0000457E5E	RefSeq:XP_015644281.1	SEG:seg

Description

Similar to GTP-binding protein lepA. (Os06t0144800-01)

Coordinates

chr6:-:2366746..2372091

Molecular Weight (calculated)

72846.8 Da

IEP (calculated)

8.028

GRAVY (calculated)

-0.196

Length

663 amino acids

Sequence
(BLAST)

001: MAGAAALRRS ARRVVLPGAY ALSRALQHPE RLLSSQASPD RGGVLGSELG LYPPERVRNF SIIAHVDHGK STLADRLLEL TGTIKKGHGQ PQYLDKLQVE
101: RERGITVKAQ TATMFYRHAN NQLPASDQPD APSYLLNLID TPGHVDFSYE VSRSLAACQG ALLVVDAAQG VQAQTIANFY LAFESNLSII PVINKIDQPT
201: ADPDNVKAQL KRLFDIDPSE ALLTSAKTGQ GLSQVLPAVI ERIPSPPGKC DSPVRMLLLD SYYDEYKGVI CHVAVVDGAL HKGDKIASAA TGRTYEVLDV
301: GIMHPELTPT GVLYTGQVGY VISGMRSTKE ARIGDTLHQA KSIVEPLPGF KPARHMVFSG LYPADGSDFD ALSHAIEKLT CNDASVSVTK ETSTALGMGF
401: RCGFLGLLHM DVFHQRLEQE HGAQVISTIP TVPYIFEYGD GSKVQVENPA ALASNPGKRI AACWEPTVIA TIIIPSEYVG PVIMLCSERR GEQQEYTFID
501: AQRALLKYRL PLREIIVDFY NELKSITSGY ATFDYEDSEY QQSDLVKMDI LLNGQPVDAM ATIVHNQKAQ RVGRELVDKL KKFIERQMFE ITIQAAVGSK
601: VIARETLSAM RKNVLAKCYG GDITRKKKLL EKQKEGKKRM KRVGSVDIPQ EAFHELLKVS NSK

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.