Factsheet for Solyc03g058880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034344	Potato	mitochondrion	97.73	97.88
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	85.91	83.26
GSMUA_Achr10P...	Banana	mitochondrion	83.03	81.19
KRH40434	Soybean	mitochondrion	82.27	80.44
Os06t0144800-01	Rice	mitochondrion	77.88	77.53
EER89181	Sorghum	mitochondrion	77.73	77.14
AT5G39900.1	Thale cress	mitochondrion	77.12	76.77
Bra028444.1-P	Field mustard	mitochondrion	76.82	76.7
TraesCS4A01G386100.3	Wheat	mitochondrion	76.82	76.13
TraesCS7D01G081700.2	Wheat	mitochondrion	76.52	75.83
HORVU7Hr1G019550.9	Barley	mitochondrion	76.67	75.75
TraesCS7A01G087200.1	Wheat	mitochondrion	76.21	75.53
Zm00001d000213_P001	Maize	mitochondrion	77.12	74.85
CDX67441	Canola	plastid	77.12	74.2
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	76.52	73.4
KRH00796	Soybean	nucleus	52.73	52.97
Solyc04g015450.2.1	Tomato	nucleus	47.42	45.96
Solyc03g058190.2.1	Tomato	plastid	23.48	23.07
Solyc07g053470.2.1	Tomato	mitochondrion	22.73	22.52
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	18.03	15.45
Solyc01g090690.2.1	Tomato	plastid	17.58	15.26
Solyc08g062920.2.1	Tomato	nucleus, plastid	19.09	15.22
Solyc08g079180.2.1	Tomato	plastid	16.82	14.1
Solyc11g071770.1.1	Tomato	cytosol	19.55	12.6
Solyc07g007210.2.1	Tomato	nucleus	15.91	11.35

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005759	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0043022	GO:GO:0045727	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363	UniProt:K4BGT6
InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512
PANTHER:PTHR43512:SF3	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	EnsemblPlantsGene:Solyc03g058880.2
EnsemblPlants:Solyc03g058880.2.1	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0002768CD2
SEG:seg	:	:	:	:	:

Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:K4BGT6]

Coordinates

chr3:+:26421264..26430196

Molecular Weight (calculated)

73183.1 Da

IEP (calculated)

8.384

GRAVY (calculated)

-0.180

Length

660 amino acids

Sequence
(BLAST)

001: MTTFKRASKA LTSKFSAIYT CNFHPVTSLS HFSYTLNASF CSRPRQNNKE ASTIDLNQYP SDNIRNFSII AHVDHGKSTL ADRLLELTGT IRKGHGQPQY
101: LDKLQVERER GITVKAQTAT MFHRHKFLGS DTDFLLNLID TPGHVDFSYE VSRSLAACQG ALLVVDAAQG VQAQTVANFY LAFESNLAII PVINKIDQPT
201: ADPDRVKTQL KSMFDLNPSD VLLTSAKTGL GLEHVLPAAI ERIPPPPGKN TSPLRMLLLD SYYDEYKGVI CHVAIVDGAL HKGDKICSAA TGQSYEVSDV
301: GIMHPELVAT GILLTGQVGY IVSGMRSTKE ARVGDTLHHT RTVIQPLPGF KPAKHMVFSG LYPADGSDFE ALNHAIERLT CNDASVSVTK ESSTALGLGF
401: RCGFLGLLHM DVFHQRLEQE HGAHVISTVP TVPYIFEYSD GSKLQIQNPA ALPSNPKNRL TACWEPTVIA TIIIPSEYVG SVITLCAERR GEQLEYSFID
501: SQRAFMRYRM PLREIVVDFY NELKSITSGY ASFDYEDSEY QASDLVKLDI LLNGQPVDAM ATIVHKSKAP RVGRELVEKL KKFIDRQMFE IIIQAAIGSK
601: VIARETLSAM RKNVLAKCYG GDVTRKRKLL EKQKEGKKRM KRVGSVDIPQ EAFHELLKVS

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.