Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007735 | Potato | cytosol | 97.46 | 97.56 |
| CDY10337 | Canola | cytosol | 36.52 | 78.9 |
| CDY32224 | Canola | cytosol | 37.99 | 75.53 |
| CDY10688 | Canola | cytosol | 63.57 | 74.66 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 74.71 | 74.27 |
| AT3G22980.2 | Thale cress | cytosol | 73.44 | 74.09 |
| KRH40894 | Soybean | cytosol | 24.8 | 73.41 |
| Bra033543.1-P | Field mustard | cytosol | 63.87 | 71.87 |
| KRG94823 | Soybean | cytosol | 70.61 | 70.74 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 32.62 | 69.44 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 54.88 | 68.2 |
| CDY32225 | Canola | nucleus | 23.34 | 67.51 |
| Os03t0650700-01 | Rice | cytosol | 60.64 | 60.35 |
| Zm00001d033505_P001 | Maize | cytosol | 60.74 | 59.58 |
| KXG37923 | Sorghum | cytosol | 60.74 | 59.52 |
| TraesCS5B01G373200.1 | Wheat | cytosol | 60.74 | 59.52 |
| TraesCS5A01G370800.1 | Wheat | cytosol | 60.64 | 59.43 |
| TraesCS5D01G380500.1 | Wheat | cytosol | 60.45 | 59.23 |
| KXG30393 | Sorghum | nucleus | 45.21 | 52.49 |
| HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 59.77 | 52.49 |
| TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 49.9 | 51.62 |
| Os02t0543300-00 | Rice | mitochondrion | 50.39 | 51.34 |
| TraesCS1B01G062700.1 | Wheat | cytosol | 50.29 | 51.19 |
| TraesCS1D01G049600.1 | Wheat | cytosol | 46.78 | 50.0 |
| HORVU1Hr1G009320.1 | Barley | nucleus | 35.35 | 40.49 |
| Solyc08g062910.2.1 | Tomato | cytosol, extracellular, nucleus, unclear | 27.05 | 35.97 |
| Solyc08g062920.2.1 | Tomato | nucleus, plastid | 28.81 | 35.63 |
| Solyc07g007210.2.1 | Tomato | nucleus | 25.59 | 28.32 |
| Solyc08g079180.2.1 | Tomato | plastid | 17.19 | 22.36 |
| Solyc01g090690.2.1 | Tomato | plastid | 15.33 | 20.66 |
| Solyc03g058880.2.1 | Tomato | mitochondrion | 12.6 | 19.55 |
| Solyc07g053470.2.1 | Tomato | mitochondrion | 12.11 | 18.62 |
| Solyc04g015450.2.1 | Tomato | nucleus | 12.3 | 18.5 |
| Solyc03g058190.2.1 | Tomato | plastid | 11.52 | 17.56 |
Protein Annotations
| MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 | Gene3D:3.90.1430.10 |
| InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0016787 | InterPro:IPR000795 | UniProt:K4DAN4 | InterPro:P-loop_NTPase |
| PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PFAM:PF14492 | PRINTS:PR00315 | PFscan:PS51722 |
| PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | SMART:SM00838 | SUPFAM:SSF50447 | SUPFAM:SSF52540 |
| SUPFAM:SSF54211 | SUPFAM:SSF54980 | EnsemblPlantsGene:Solyc11g071770.1 | EnsemblPlants:Solyc11g071770.1.1 | InterPro:TF_GTP-bd_dom | InterPro:Transl_B-barrel_sf |
| UniParc:UPI0002769980 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:55145763..55148837
Molecular Weight (calculated)
112814.0 Da
IEP (calculated)
5.559
GRAVY (calculated)
-0.186
Length
1024 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDFEGEKIR NICILAHVDH GKTTLADHLI ASSGGGVLHP KQAGKLRFMD YLDEEQRRAI TMKSSSIGLK YKEHSINLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI VELRLTPLEA YTRLQRIVHE VNSIVSAYKS EKYLSDVDSL LSAPAGLVED ENPDLELLEE
0201: DEEDTFQPQK GNVAFVCALD GWGFSISDFA EFYASKLGAS SAAMQKALWG PRYYNAKTKM IVGKKGISSG SKARPMFVQF VLEPLWQVYQ AAVEEDGDRG
0301: MLEKVIKSFN LSIPPRELQN KDPKFVLQSV MSRWLPLSDT ILSMAVKHMP DPVSAQSFRI SRLLPKRTLL DMGANPDVLS EAELVRKSVE SCDSSPDAPC
0401: VVFVSKMFAI PSKMLPRGEI MDDSGNGDSD ECFLAFARIF SGVLHAGQKV FVLTALYDPL KEESMQKHVQ EAELQSLYLM MGQGLKPVAS AKAGNVIAIR
0501: GLAQHILKSA TLSSTLNCWP LSSMTFQVSP MLKVAIEPSD PADMGALIKG LRLLNRADPF VEVSISARGE HVLAAAGEVH LERCIKDLKE RFAKINLEVS
0601: APLVSFKETI EGDSANPLEN LKLLSRSSDY LEKETPNGRC VVRVRVMKLP TALTKLLDES SELLEDIIGG KSLQACRSSE TLRGNVVEDE NPIEAFKKRL
0701: IDAVESDFST GFADTEKDRI DKCKKTWQKF LKRIWALGPR QVGPNILLTP DVKGKSADVS ILIKGSPYVS KKLGFTDDND DSSASPESST SLDPTLLREA
0801: ENLESSILSG FQLATASGPL CDEPMWGLAF VIEASISPLA TQPNDSETGP IPQPEQYGLL PGQVMTVVKD ACRAAVLQSK PRLVEAMYFC ELNTPHDQLG
0901: NTYTVLNRRR AHVVNEEMQE GSSLFTVHAY VPVAESFGFA DELRRKTSGA ASALLVLSHW EALPEDPFFV PRTEEEKEEF GDGASVPQSI ARKLMDSVRR
1001: KKGLPVEEKV VQFATKQRTL ARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI VELRLTPLEA YTRLQRIVHE VNSIVSAYKS EKYLSDVDSL LSAPAGLVED ENPDLELLEE
0201: DEEDTFQPQK GNVAFVCALD GWGFSISDFA EFYASKLGAS SAAMQKALWG PRYYNAKTKM IVGKKGISSG SKARPMFVQF VLEPLWQVYQ AAVEEDGDRG
0301: MLEKVIKSFN LSIPPRELQN KDPKFVLQSV MSRWLPLSDT ILSMAVKHMP DPVSAQSFRI SRLLPKRTLL DMGANPDVLS EAELVRKSVE SCDSSPDAPC
0401: VVFVSKMFAI PSKMLPRGEI MDDSGNGDSD ECFLAFARIF SGVLHAGQKV FVLTALYDPL KEESMQKHVQ EAELQSLYLM MGQGLKPVAS AKAGNVIAIR
0501: GLAQHILKSA TLSSTLNCWP LSSMTFQVSP MLKVAIEPSD PADMGALIKG LRLLNRADPF VEVSISARGE HVLAAAGEVH LERCIKDLKE RFAKINLEVS
0601: APLVSFKETI EGDSANPLEN LKLLSRSSDY LEKETPNGRC VVRVRVMKLP TALTKLLDES SELLEDIIGG KSLQACRSSE TLRGNVVEDE NPIEAFKKRL
0701: IDAVESDFST GFADTEKDRI DKCKKTWQKF LKRIWALGPR QVGPNILLTP DVKGKSADVS ILIKGSPYVS KKLGFTDDND DSSASPESST SLDPTLLREA
0801: ENLESSILSG FQLATASGPL CDEPMWGLAF VIEASISPLA TQPNDSETGP IPQPEQYGLL PGQVMTVVKD ACRAAVLQSK PRLVEAMYFC ELNTPHDQLG
0901: NTYTVLNRRR AHVVNEEMQE GSSLFTVHAY VPVAESFGFA DELRRKTSGA ASALLVLSHW EALPEDPFFV PRTEEEKEEF GDGASVPQSI ARKLMDSVRR
1001: KKGLPVEEKV VQFATKQRTL ARKV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.