Factsheet for GSMUA_Achr2P17400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10337	Canola	cytosol	36.77	63.92
KRH40894	Soybean	cytosol	24.76	58.96
CDY10688	Canola	cytosol	59.34	56.08
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	32.16	55.09
PGSC0003DMT400007735	Potato	cytosol	68.33	55.03
VIT_04s0044g01790.t01	Wine grape	cytosol	68.69	54.95
KRG94823	Soybean	cytosol	68.08	54.89
Solyc11g071770.1.1	Tomato	cytosol	68.2	54.88
CDY32225	Canola	nucleus	23.06	53.67
AT3G22980.2	Thale cress	cytosol	65.78	53.4
Os03t0650700-01	Rice	cytosol	64.32	51.51
Bra033543.1-P	Field mustard	cytosol	55.34	50.11
CDY32224	Canola	cytosol	30.95	49.51
TraesCS5D01G380500.1	Wheat	cytosol	62.74	49.47
KXG37923	Sorghum	cytosol	62.74	49.47
TraesCS5B01G373200.1	Wheat	cytosol	62.62	49.38
TraesCS5A01G370800.1	Wheat	cytosol	62.38	49.19
Zm00001d033505_P001	Maize	cytosol	62.14	49.04
KXG30393	Sorghum	nucleus	48.06	44.9
HORVU5Hr1G092260.1	Barley	nucleus, plastid	61.89	43.74
Os02t0543300-00	Rice	mitochondrion	52.91	43.38
TraesCS1B01G062700.1	Wheat	cytosol	50.36	41.25
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	49.39	41.11
TraesCS1D01G049600.1	Wheat	cytosol	45.63	39.25
HORVU1Hr1G009320.1	Barley	nucleus	36.53	33.67
GSMUA_Achr10P...	Banana	cytosol	27.31	29.18
GSMUA_Achr4P01020_001	Banana	cytosol	28.88	27.39
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	14.08	26.48
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	25.36	21.52
GSMUA_Achr5P13570_001	Banana	mitochondrion	14.2	16.16
GSMUA_Achr10P...	Banana	cytosol	13.47	16.02
GSMUA_Achr10P...	Banana	mitochondrion	12.26	14.96
GSMUA_Achr8P27160_001	Banana	mitochondrion	12.01	14.78
GSMUA_Achr5P14760_001	Banana	plastid	11.41	13.8
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	8.25	12.06

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	Gene3D:3.90.1430.10
MapMan:35.1	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G17400_001	EnsemblPlants:GSMUA_Achr2P17400_001	EnsemblPlants:GSMUA_Achr2T17400_001
InterPro:IPR000795	InterPro:IPR014721	UniProt:M0S8T1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF14492	PANTHER:PTHR42908	PANTHER:PTHR42908:SF12	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf
UniParc:UPI0002955415	:	:	:	:	:

Description

Putative Elongation factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17400_001]

Coordinates

chr2:-:17964362..17969425

Molecular Weight (calculated)

91824.3 Da

IEP (calculated)

7.130

GRAVY (calculated)

-0.145

Length

824 amino acids

Sequence
(BLAST)

001: MSDSTCIEIR NICILAHVDH GKTTLADHLI AACGGGVLHP KLAGRLRYMD YLDEEQRRAI TMKIEGVHIQ THAVLRQAWV EKLTPCLVLN KIDRLITELK
101: LSPMEAYNRL QRIVHEVNAI VSAYKSEKYL SDDMFQPQKG NVAFVCALDG WGFCLSHFAE IYASKLGASM TALVKGLWGP RYYHTKKMMI VGKKGIEGVT
201: KDPQPMFVQF VLKPLWQVYQ AALEADGDRR MLDKVISTFN LSVPQRELQN KDPKIVLQAV MSRWLPLSDT ILSMVVKCMP DPISAQSARI SRLLPKREGL
301: NGEILNNQPT GEAGESDEHV QEAELQSLYL MMGQGLVPVS SASAGNVVAI QGLGQFILKS ATLSSTRNCW PFSSMMFQVA PTLRVAIEPS NPADIGALVK
401: GLRLLNRADP FVEITVSSRG EQVLAAAGEV HLERCIKDLK ERFAKVSLEV SPPLVSFKET IEGEVQVMKL PRTLTKVLEE CSDVLEDIFE GQSRKKDGSL
501: GSHITQDDCE LIDKDRVERC RRMWFEFLQM IWSLGPSQVG PNVLLVPDSG TGNVDSCSQG QRGMLIRGSC DVSKRLAEAL KSSIVSGFQL ATAAGPLCDE
601: PMWGLAFLVE PYIFRDTSDA SNQSDQYGIL GGQLNTPTEY LGAMYGVLGK MRARVLKEEM QEGSSLFTVH AYVPVAESFG FADELRKRTS GAASALLVLS
701: HWEELPEDPF FVPKTEEEIE EFGDGSSVLP NMARKLMNSV RRRKGLHVEE KVVQHATKQR TLARKVCIIL QSDIAFCLDF FFHCFCYIKM LEAHGLVVAK
801: DVSWSQSCKN KSHRSYRRKH ENDG

Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)

0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV

Arabidopsis Description

Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.