Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 78.64 | 71.01 |
| TraesCS1B01G062700.1 | Wheat | cytosol | 79.64 | 70.78 |
| TraesCS1D01G049600.1 | Wheat | cytosol | 73.6 | 68.68 |
| KXG30393 | Sorghum | nucleus | 49.44 | 50.11 |
| CDY32225 | Canola | nucleus | 18.01 | 45.48 |
| Os02t0543300-00 | Rice | mitochondrion | 47.2 | 41.99 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 21.92 | 40.75 |
| HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 49.11 | 37.65 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 33.67 | 36.53 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 41.83 | 36.31 |
| KRG94823 | Soybean | cytosol | 41.39 | 36.2 |
| AT3G22980.2 | Thale cress | cytosol | 40.38 | 35.57 |
| PGSC0003DMT400007735 | Potato | cytosol | 40.49 | 35.39 |
| Solyc11g071770.1.1 | Tomato | cytosol | 40.49 | 35.35 |
| CDY10688 | Canola | cytosol | 34.45 | 35.32 |
| Bra033543.1-P | Field mustard | cytosol | 34.56 | 33.96 |
| CDY32224 | Canola | cytosol | 15.21 | 26.41 |
| HORVU5Hr1G116710.1 | Barley | cytosol | 16.78 | 25.55 |
| CDY10337 | Canola | cytosol | 12.53 | 23.63 |
| HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 19.91 | 21.12 |
| HORVU7Hr1G106150.1 | Barley | cytosol | 19.91 | 21.12 |
| HORVU3Hr1G057880.1 | Barley | cytosol | 19.57 | 20.76 |
| HORVU3Hr1G057890.1 | Barley | cytosol | 19.57 | 20.76 |
| KRH40894 | Soybean | cytosol | 6.82 | 17.63 |
| HORVU1Hr1G003960.9 | Barley | cytosol | 17.9 | 17.35 |
| HORVU7Hr1G090710.6 | Barley | plastid | 18.12 | 16.36 |
| HORVU2Hr1G092180.1 | Barley | plastid | 10.63 | 12.45 |
| HORVU7Hr1G082910.2 | Barley | mitochondrion | 10.29 | 12.14 |
| HORVU3Hr1G072230.1 | Barley | plastid | 8.5 | 10.94 |
| HORVU7Hr1G019550.9 | Barley | mitochondrion | 6.94 | 9.28 |
| HORVU6Hr1G025110.1 | Barley | plastid | 5.48 | 9.18 |
| HORVU6Hr1G050160.1 | Barley | plastid | 5.15 | 8.63 |
| HORVU6Hr1G025120.1 | Barley | cytosol | 0.78 | 6.48 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.90.1430.10 | MapMan:35.1 |
| UniProt:A0A287ELD3 | ncoils:Coil | InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | EnsemblPlantsGene:HORVU1Hr1G009320 | EnsemblPlants:HORVU1Hr1G009320.1 | InterPro:IPR014721 |
| PFAM:PF00679 | PFAM:PF03144 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr |
| SMART:SM00838 | SUPFAM:SSF50447 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:Transl_B-barrel_sf | UniParc:UPI000B47C6CA |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:20682891..20685963
Molecular Weight (calculated)
99112.7 Da
IEP (calculated)
10.171
GRAVY (calculated)
-0.449
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: RESSRATPQK AQTLASIHGG GGGGWRPSAG PQHLHHGARG PREDHAGRPP CGVRRRRPPQ PEHGRQGPLH GPPAGGAGAG HHDQVRLRLA PPPRRHPRPP
101: HRLPRPRRLL LRGLRRRPGG RLGAHRCRCR RWPRRPDARR AAQGLRRAPP PLPRPQQARP PHHRPPPRSR GRLRPPPRHR RRGQLRLLHP KKAMALADGM
201: KQQPMFVEFV LRRLWKVYDH GLKVDGATWL RDHVVHTFNL KVSERELQSK DRPKAVLEAV MRAWLPLAET VMTMIVECTP DPVAAQRFRA PALMPERELS
301: TWVSTEHAGI IAETEKVRRC VVACSASSSA PVVVFVSKMF VVKHKDLPPT LNHGQDTTGE PEECFLAFAR VFSGVLHAGQ KVFVLSSMYD PVKGDTTGKH
401: LKEVEVQQLY EMLGEGLRPV ATVGTGNVAA IKGIGEHIMK TATLSSTRNC WPFASMAFQV HLEHCVKNLR ERFAKVELNV SEPLVSFKET IQGEGVGLID
501: SLKDPQGYVE RIAPDGKFAV RVKVIRLPDA LVKVLEENEE LLSLTIKGQT ARSDGAIGSQ CPRDDDGSMA VLRQDMLSAV ESELEALSAH ADEVKLEWYR
601: KTLLGYLHKI CALGPSEVGP NLLLMPGVKL SSSLTTIQNG RGGILVHGTY HVSEKLGFVS VSNEAEISNG IIDDSEPSTD VPDPEALKNI IISGFQEVTN
701: AGPLCDEPMW GLAFIVEPYV FSGSPDSVNY SYQHKAAVRE ACRAAVLQSK PRLVEPMYFC EVTTPIERLG SVYSVLGDCR AKVQESEMQL ETFLYMVHAH
801: LPVAESSEFS EKLWNGSSGA ATARLTFSHW EAIPQDPFFV PKTKEEIEEF GDGSNMGPNL AKKLIDSVRR RKGLHVDDKV VKHGTKQRTR AKKV
101: HRLPRPRRLL LRGLRRRPGG RLGAHRCRCR RWPRRPDARR AAQGLRRAPP PLPRPQQARP PHHRPPPRSR GRLRPPPRHR RRGQLRLLHP KKAMALADGM
201: KQQPMFVEFV LRRLWKVYDH GLKVDGATWL RDHVVHTFNL KVSERELQSK DRPKAVLEAV MRAWLPLAET VMTMIVECTP DPVAAQRFRA PALMPERELS
301: TWVSTEHAGI IAETEKVRRC VVACSASSSA PVVVFVSKMF VVKHKDLPPT LNHGQDTTGE PEECFLAFAR VFSGVLHAGQ KVFVLSSMYD PVKGDTTGKH
401: LKEVEVQQLY EMLGEGLRPV ATVGTGNVAA IKGIGEHIMK TATLSSTRNC WPFASMAFQV HLEHCVKNLR ERFAKVELNV SEPLVSFKET IQGEGVGLID
501: SLKDPQGYVE RIAPDGKFAV RVKVIRLPDA LVKVLEENEE LLSLTIKGQT ARSDGAIGSQ CPRDDDGSMA VLRQDMLSAV ESELEALSAH ADEVKLEWYR
601: KTLLGYLHKI CALGPSEVGP NLLLMPGVKL SSSLTTIQNG RGGILVHGTY HVSEKLGFVS VSNEAEISNG IIDDSEPSTD VPDPEALKNI IISGFQEVTN
701: AGPLCDEPMW GLAFIVEPYV FSGSPDSVNY SYQHKAAVRE ACRAAVLQSK PRLVEPMYFC EVTTPIERLG SVYSVLGDCR AKVQESEMQL ETFLYMVHAH
801: LPVAESSEFS EKLWNGSSGA ATARLTFSHW EAIPQDPFFV PKTKEEIEEF GDGSNMGPNL AKKLIDSVRR RKGLHVDDKV VKHGTKQRTR AKKV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.