Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY10337 | Canola | cytosol | 35.83 | 77.85 |
KRG94823 | Soybean | cytosol | 74.76 | 75.34 |
Solyc11g071770.1.1 | Tomato | cytosol | 74.27 | 74.71 |
CDY10688 | Canola | cytosol | 63.11 | 74.54 |
PGSC0003DMT400007735 | Potato | cytosol | 73.98 | 74.49 |
CDY32224 | Canola | cytosol | 37.09 | 74.17 |
KRH40894 | Soybean | cytosol | 24.47 | 72.83 |
Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 33.98 | 72.77 |
AT3G22980.2 | Thale cress | cytosol | 71.36 | 72.41 |
Bra033543.1-P | Field mustard | cytosol | 63.59 | 71.98 |
CDY32225 | Canola | nucleus | 24.08 | 70.06 |
GSMUA_Achr2P17400_001 | Banana | cytosol | 54.95 | 68.69 |
Os03t0650700-01 | Rice | cytosol | 62.43 | 62.49 |
TraesCS5B01G373200.1 | Wheat | cytosol | 61.16 | 60.29 |
TraesCS5A01G370800.1 | Wheat | cytosol | 61.16 | 60.29 |
TraesCS5D01G380500.1 | Wheat | cytosol | 60.97 | 60.1 |
KXG37923 | Sorghum | cytosol | 60.19 | 59.33 |
Zm00001d033505_P001 | Maize | cytosol | 59.9 | 59.1 |
KXG30393 | Sorghum | nucleus | 46.12 | 53.85 |
Os02t0543300-00 | Rice | mitochondrion | 52.14 | 53.43 |
HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 60.29 | 53.26 |
TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 50.0 | 52.02 |
TraesCS1B01G062700.1 | Wheat | cytosol | 50.29 | 51.49 |
TraesCS1D01G049600.1 | Wheat | cytosol | 46.6 | 50.1 |
HORVU1Hr1G009320.1 | Barley | nucleus | 36.31 | 41.83 |
VIT_19s0027g00760.t01 | Wine grape | cytosol | 29.13 | 35.17 |
VIT_11s0118g00720.t01 | Wine grape | nucleus | 24.56 | 25.61 |
VIT_00s0323g00080.t01 | Wine grape | plastid | 16.8 | 22.32 |
VIT_15s0021g02450.t01 | Wine grape | mitochondrion, plastid | 14.95 | 20.64 |
VIT_00s1286g00020.t01 | Wine grape | cytosol, mitochondrion | 3.98 | 19.43 |
VIT_12s0028g02640.t01 | Wine grape | mitochondrion, plastid | 12.43 | 19.05 |
VIT_07s0031g03050.t01 | Wine grape | plastid | 12.52 | 18.97 |
VIT_08s0007g08290.t01 | Wine grape | plastid | 12.33 | 18.81 |
VIT_14s0108g00130.t01 | Wine grape | mitochondrion, plastid | 12.04 | 18.21 |
Protein Annotations
EntrezGene:100248167 | wikigene:100248167 | MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 |
Gene3D:3.40.50.300 | Gene3D:3.90.1430.10 | ProteinID:CCB60383 | ProteinID:CCB60383.1 | InterPro:EFG_III/V | InterPro:EFG_V-like |
InterPro:EFTu-like_2 | UniProt:F6I0B7 | EMBL:FN596506 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 | EntrezGene:LOC100248167 |
wikigene:LOC100248167 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PRINTS:PR00315 |
PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | SMART:SM00838 | SUPFAM:SSF50447 |
SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:Small_GTP-bd_dom | TIGR:TC57380 | TIGR:TC68020 |
InterPro:TF_GTP-bd_dom | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI000210A57B | ArrayExpress:VIT_04s0044g01790 | EnsemblPlantsGene:VIT_04s0044g01790 |
EnsemblPlants:VIT_04s0044g01790.t01 | unigene:Vvi.2227 | RefSeq:XP_002265210 | RefSeq:XP_002265210.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4:+:23620362..23624150
Molecular Weight (calculated)
113710.0 Da
IEP (calculated)
5.878
GRAVY (calculated)
-0.144
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADIECPNIR NICILAHVDH GKTTLADHLI AAAADGLVHP KQAGRLRFMD YLDEEQRRAI TMKSSSVTLR FNDIYHINLI DSPGHMDFCS EVSTAARLSD
0101: GALVLVDAVE GVHIQTHAVL RQAWTERLSP CLVLNKIDRL ISELKLSPLE AYSKLVRIVH EVNGIMSAFK SQKYLSDVDL LLAGPAGENL ENLELVEDDE
0201: EDTFQPQKGN VAFVCALDGW GFRINEFAEF YVSKLGASAA ALQKALWGPK YYNQKTKMIV GKKGMGGGSK ARPMFVQFVL EPLWQVYQAA LEPDGDKSML
0301: QKVIKSFNLN VSARELQHKD PKVVLLAVLS RWLPLSDAIL SMVVKCIPDP MRAQSFRISR LLPKREVSDD GPSSNVLAEA ELVRKSVEAC DFSPEAPCVA
0401: FVSKMFAVPI KMLPQRGPNG DILNNSTDEG GSGESDECFI AFARVFSGVL FAGQRVFVLS ALYDPLKPEA MQKHVQEAEL HSLYLMMGQG LKPVALAKAG
0501: NIVAIRGLGQ HILKSATLSS TKNCWPFSSL VFQVSPTLRV AIEPSDPTDM GALMKGLRLL NRADPFVEVS VSARGEHVLA AAGEVHLERC IKDLKDRFAR
0601: VSLEVSPPLV PYKETIQGEV SDLLENLKSL SGSLDYIERK TPNGRCCVRV QVLKLPPSLT KVLDKSADLL RDIIGGKLGQ SNKSSETQRS SRLEDENSIE
0701: ALRKRIMDAV EGDILGGTEE SDKDRAEKCK AMWLQFLKRI WALGPRQIGP NILFTPDSRG EDVEFPVLVR GSSHVSERLG FVDESSNGGM DAEPSSVVTP
0801: ALCMEAESLE SSVISGFQLA TAAGPLCEEP MWGLAFVIEA RISPLEGQQS DDLETSYQPL EQYGIFTGQV MNTVKDACRT AVLQKKPRLV EAMYFCELNT
0901: PTEYLGPMYA VLARRRARVL KEEMQEGSSL FTVHAYVPVS ESFGFPDELR RWTSGASSAL LVLSHWEALP EDPFFVPKTE EEIEEFGDGS SVLHNTARKL
1001: IDAVRRQKGL PVEEKVVQHA TKQRTLARKV
0101: GALVLVDAVE GVHIQTHAVL RQAWTERLSP CLVLNKIDRL ISELKLSPLE AYSKLVRIVH EVNGIMSAFK SQKYLSDVDL LLAGPAGENL ENLELVEDDE
0201: EDTFQPQKGN VAFVCALDGW GFRINEFAEF YVSKLGASAA ALQKALWGPK YYNQKTKMIV GKKGMGGGSK ARPMFVQFVL EPLWQVYQAA LEPDGDKSML
0301: QKVIKSFNLN VSARELQHKD PKVVLLAVLS RWLPLSDAIL SMVVKCIPDP MRAQSFRISR LLPKREVSDD GPSSNVLAEA ELVRKSVEAC DFSPEAPCVA
0401: FVSKMFAVPI KMLPQRGPNG DILNNSTDEG GSGESDECFI AFARVFSGVL FAGQRVFVLS ALYDPLKPEA MQKHVQEAEL HSLYLMMGQG LKPVALAKAG
0501: NIVAIRGLGQ HILKSATLSS TKNCWPFSSL VFQVSPTLRV AIEPSDPTDM GALMKGLRLL NRADPFVEVS VSARGEHVLA AAGEVHLERC IKDLKDRFAR
0601: VSLEVSPPLV PYKETIQGEV SDLLENLKSL SGSLDYIERK TPNGRCCVRV QVLKLPPSLT KVLDKSADLL RDIIGGKLGQ SNKSSETQRS SRLEDENSIE
0701: ALRKRIMDAV EGDILGGTEE SDKDRAEKCK AMWLQFLKRI WALGPRQIGP NILFTPDSRG EDVEFPVLVR GSSHVSERLG FVDESSNGGM DAEPSSVVTP
0801: ALCMEAESLE SSVISGFQLA TAAGPLCEEP MWGLAFVIEA RISPLEGQQS DDLETSYQPL EQYGIFTGQV MNTVKDACRT AVLQKKPRLV EAMYFCELNT
0901: PTEYLGPMYA VLARRRARVL KEEMQEGSSL FTVHAYVPVS ESFGFPDELR RWTSGASSAL LVLSHWEALP EDPFFVPKTE EEIEEFGDGS SVLHNTARKL
1001: IDAVRRQKGL PVEEKVVQHA TKQRTLARKV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.