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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10337 Canola cytosol 35.83 77.85
KRG94823 Soybean cytosol 74.76 75.34
Solyc11g071770.1.1 Tomato cytosol 74.27 74.71
CDY10688 Canola cytosol 63.11 74.54
PGSC0003DMT400007735 Potato cytosol 73.98 74.49
CDY32224 Canola cytosol 37.09 74.17
KRH40894 Soybean cytosol 24.47 72.83
Bra033895.1-P Field mustard cytosol, nucleus, plastid 33.98 72.77
AT3G22980.2 Thale cress cytosol 71.36 72.41
Bra033543.1-P Field mustard cytosol 63.59 71.98
CDY32225 Canola nucleus 24.08 70.06
GSMUA_Achr2P17400_001 Banana cytosol 54.95 68.69
Os03t0650700-01 Rice cytosol 62.43 62.49
TraesCS5B01G373200.1 Wheat cytosol 61.16 60.29
TraesCS5A01G370800.1 Wheat cytosol 61.16 60.29
TraesCS5D01G380500.1 Wheat cytosol 60.97 60.1
KXG37923 Sorghum cytosol 60.19 59.33
Zm00001d033505_P001 Maize cytosol 59.9 59.1
KXG30393 Sorghum nucleus 46.12 53.85
Os02t0543300-00 Rice mitochondrion 52.14 53.43
HORVU5Hr1G092260.1 Barley nucleus, plastid 60.29 53.26
TraesCS1A01G048300.1 Wheat mitochondrion, nucleus, plastid 50.0 52.02
TraesCS1B01G062700.1 Wheat cytosol 50.29 51.49
TraesCS1D01G049600.1 Wheat cytosol 46.6 50.1
HORVU1Hr1G009320.1 Barley nucleus 36.31 41.83
VIT_19s0027g00760.t01 Wine grape cytosol 29.13 35.17
VIT_11s0118g00720.t01 Wine grape nucleus 24.56 25.61
VIT_00s0323g00080.t01 Wine grape plastid 16.8 22.32
VIT_15s0021g02450.t01 Wine grape mitochondrion, plastid 14.95 20.64
VIT_00s1286g00020.t01 Wine grape cytosol, mitochondrion 3.98 19.43
VIT_12s0028g02640.t01 Wine grape mitochondrion, plastid 12.43 19.05
VIT_07s0031g03050.t01 Wine grape plastid 12.52 18.97
VIT_08s0007g08290.t01 Wine grape plastid 12.33 18.81
VIT_14s0108g00130.t01 Wine grape mitochondrion, plastid 12.04 18.21
Protein Annotations
EntrezGene:100248167wikigene:100248167MapMan:17.1.2.2.3.4Gene3D:2.40.30.10Gene3D:3.30.70.240Gene3D:3.30.70.870
Gene3D:3.40.50.300Gene3D:3.90.1430.10ProteinID:CCB60383ProteinID:CCB60383.1InterPro:EFG_III/VInterPro:EFG_V-like
InterPro:EFTu-like_2UniProt:F6I0B7EMBL:FN596506GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:IPR000795EntrezGene:LOC100248167
wikigene:LOC100248167InterPro:P-loop_NTPasePFAM:PF00009PFAM:PF00679PFAM:PF03144PRINTS:PR00315
PFscan:PS51722PANTHER:PTHR42908PANTHER:PTHR42908:SF12InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00838SUPFAM:SSF50447
SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF54980InterPro:Small_GTP-bd_domTIGR:TC57380TIGR:TC68020
InterPro:TF_GTP-bd_domTIGRFAMs:TIGR00231InterPro:Transl_B-barrel_sfUniParc:UPI000210A57BArrayExpress:VIT_04s0044g01790EnsemblPlantsGene:VIT_04s0044g01790
EnsemblPlants:VIT_04s0044g01790.t01unigene:Vvi.2227RefSeq:XP_002265210RefSeq:XP_002265210.1SEG:seg:
Description
No Description!
Coordinates
chr4:+:23620362..23624150
Molecular Weight (calculated)
113710.0 Da
IEP (calculated)
5.878
GRAVY (calculated)
-0.144
Length
1030 amino acids
Sequence
(BLAST)
0001: MADIECPNIR NICILAHVDH GKTTLADHLI AAAADGLVHP KQAGRLRFMD YLDEEQRRAI TMKSSSVTLR FNDIYHINLI DSPGHMDFCS EVSTAARLSD
0101: GALVLVDAVE GVHIQTHAVL RQAWTERLSP CLVLNKIDRL ISELKLSPLE AYSKLVRIVH EVNGIMSAFK SQKYLSDVDL LLAGPAGENL ENLELVEDDE
0201: EDTFQPQKGN VAFVCALDGW GFRINEFAEF YVSKLGASAA ALQKALWGPK YYNQKTKMIV GKKGMGGGSK ARPMFVQFVL EPLWQVYQAA LEPDGDKSML
0301: QKVIKSFNLN VSARELQHKD PKVVLLAVLS RWLPLSDAIL SMVVKCIPDP MRAQSFRISR LLPKREVSDD GPSSNVLAEA ELVRKSVEAC DFSPEAPCVA
0401: FVSKMFAVPI KMLPQRGPNG DILNNSTDEG GSGESDECFI AFARVFSGVL FAGQRVFVLS ALYDPLKPEA MQKHVQEAEL HSLYLMMGQG LKPVALAKAG
0501: NIVAIRGLGQ HILKSATLSS TKNCWPFSSL VFQVSPTLRV AIEPSDPTDM GALMKGLRLL NRADPFVEVS VSARGEHVLA AAGEVHLERC IKDLKDRFAR
0601: VSLEVSPPLV PYKETIQGEV SDLLENLKSL SGSLDYIERK TPNGRCCVRV QVLKLPPSLT KVLDKSADLL RDIIGGKLGQ SNKSSETQRS SRLEDENSIE
0701: ALRKRIMDAV EGDILGGTEE SDKDRAEKCK AMWLQFLKRI WALGPRQIGP NILFTPDSRG EDVEFPVLVR GSSHVSERLG FVDESSNGGM DAEPSSVVTP
0801: ALCMEAESLE SSVISGFQLA TAAGPLCEEP MWGLAFVIEA RISPLEGQQS DDLETSYQPL EQYGIFTGQV MNTVKDACRT AVLQKKPRLV EAMYFCELNT
0901: PTEYLGPMYA VLARRRARVL KEEMQEGSSL FTVHAYVPVS ESFGFPDELR RWTSGASSAL LVLSHWEALP EDPFFVPKTE EEIEEFGDGS SVLHNTARKL
1001: IDAVRRQKGL PVEEKVVQHA TKQRTLARKV
Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.