Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G380500.1 | Wheat | cytosol | 99.04 | 99.04 |
| TraesCS5A01G370800.1 | Wheat | cytosol | 98.66 | 98.66 |
| HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 96.56 | 86.54 |
| Os03t0650700-01 | Rice | cytosol | 82.01 | 83.28 |
| KXG37923 | Sorghum | cytosol | 80.1 | 80.1 |
| Zm00001d033505_P001 | Maize | cytosol | 80.0 | 80.08 |
| CDY10337 | Canola | cytosol | 29.76 | 65.61 |
| CDY10688 | Canola | cytosol | 52.92 | 63.42 |
| KRH40894 | Soybean | cytosol | 20.77 | 62.72 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 49.38 | 62.62 |
| TraesCS1B01G062700.1 | Wheat | cytosol | 59.71 | 62.03 |
| KRG94823 | Soybean | cytosol | 60.1 | 61.45 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 60.29 | 61.16 |
| CDY32224 | Canola | cytosol | 30.14 | 61.16 |
| PGSC0003DMT400007735 | Potato | cytosol | 59.62 | 60.9 |
| Solyc11g071770.1.1 | Tomato | cytosol | 59.52 | 60.74 |
| AT3G22980.2 | Thale cress | cytosol | 58.66 | 60.39 |
| Bra033543.1-P | Field mustard | cytosol | 50.72 | 58.24 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 26.6 | 57.8 |
| CDY32225 | Canola | nucleus | 18.95 | 55.93 |
| TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 27.66 | 34.28 |
| TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 27.66 | 34.28 |
| TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 27.56 | 34.16 |
| TraesCS3B01G261500.1 | Wheat | cytosol | 27.56 | 34.16 |
| TraesCS7B01G362600.1 | Wheat | cytosol | 27.56 | 34.16 |
| TraesCS1B01G033500.1 | Wheat | cytosol | 11.0 | 28.54 |
| TraesCS7B01G282300.1 | Wheat | cytosol | 24.4 | 25.65 |
| TraesCS2B01G404600.1 | Wheat | plastid | 15.02 | 20.44 |
| TraesCS7B01G248200.1 | Wheat | mitochondrion | 14.26 | 19.66 |
| TraesCS3B01G326200.1 | Wheat | mitochondrion | 12.15 | 18.87 |
| TraesCS6B01G159200.1 | Wheat | plastid | 12.06 | 18.81 |
| TraesCS6B01G224800.2 | Wheat | plastid | 11.96 | 18.52 |
Protein Annotations
| MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 |
| Gene3D:3.90.1430.10 | InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 |
| InterPro:IPR014721 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PRINTS:PR00315 |
| PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 |
| SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:TF_GTP-bd_dom | EnsemblPlantsGene:TraesCS5B01G373200 |
| EnsemblPlants:TraesCS5B01G373200.1 | InterPro:Transl_B-barrel_sf | TIGR:cd01681 | TIGR:cd01885 | TIGR:cd04096 | TIGR:cd16261 |
| TIGR:cd16268 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:550927171..550930565
Molecular Weight (calculated)
114964.0 Da
IEP (calculated)
6.457
GRAVY (calculated)
-0.158
Length
1045 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAAESTALP ADPRRVRNTC ILAHVDHGKT TLADHLVASC GDGLLHPRLA GRLRFMDYLD EEQRRAITMK SAAVLLRYGD GPAAHRVNLI DSPGHIDFCS
0101: EVSSAARLSD SALILVDAVE GVHIQTHAAL RQAFLERLRP CLVLNKLDRL ITELHLTPAE AYTRLHRILA DVNSIYSALR SHSYFSVLAS LEDQPSSSSS
0201: ASQDDLPEDA DDDEEDAFQP QKGNVVFACA LDGWGFRIHH FAELYATKLG ASASALLRGF WGPRYLDKKV DKKGKKNFMI VGKKAVEGTD REPMFVEFIL
0301: KPLWKLYEGV LGQDGEIVQK VISNFKLNIP PRELQNKDPK LVLQSVMSRW LPLADAVMAM VVECTPDPVV AQGARVARLM PKRELAPEDA AGCAEVVLEA
0401: ERVRRCVETC DAGADSPVVV YVSKMFAVPC KMLPPKGVHG ELLNHQDASE SEECFMAFAR VFSGVLRAGQ KVFVLSALYD PLKGDAVQKH VQEIELQYLY
0501: EMLGQGLRPV ASVSAGNVVA IQGLGQHILK SATLSSTKNC WPFSSMMFQV SPMLKVAIEP ANPTDLGALV KGIKLLNRAD PFVEYTVTHR GEHILAAAGE
0601: VHLERCKKDL EERFAKVKLV VSDPLVSFKE TIEGEGAGLL EGLKAPHAFV ERTTPNGRCT VRVQVLRLPN ALTKVLQESD QLLGQIMEGK TSKRNAMLNP
0701: QISQDDCDSV AMLRQRMVSA IDSELEAISE QVDKEKLQKC RKTWLGYLKR IWSLGPWQVG PNFLLLPDVE SSDGVITMED GRQGILVRGR ADFSERLGFV
0801: SGSDAEANHT PDSSKSSADT PESLHLESVA LRNSILSGFQ FATNAGPLCD EPMWGLAFII EPYIFADNSD AAHQSDQYNI FSGQVITAVK EACRAAVLQN
0901: NPRLVEGMYF CELTTPTPQL GSTYAVLGRR RAKILKEEMQ EGTSVFTVHA YLPVAESIGF SSQLRTLTSG AASALLVLSH WDAIQEDPFF VPKSQEEIEE
1001: FGDGASIGPN LAKKLMNSVR RRKGLHVEEK VVEHGTKQRT LSRKT
0101: EVSSAARLSD SALILVDAVE GVHIQTHAAL RQAFLERLRP CLVLNKLDRL ITELHLTPAE AYTRLHRILA DVNSIYSALR SHSYFSVLAS LEDQPSSSSS
0201: ASQDDLPEDA DDDEEDAFQP QKGNVVFACA LDGWGFRIHH FAELYATKLG ASASALLRGF WGPRYLDKKV DKKGKKNFMI VGKKAVEGTD REPMFVEFIL
0301: KPLWKLYEGV LGQDGEIVQK VISNFKLNIP PRELQNKDPK LVLQSVMSRW LPLADAVMAM VVECTPDPVV AQGARVARLM PKRELAPEDA AGCAEVVLEA
0401: ERVRRCVETC DAGADSPVVV YVSKMFAVPC KMLPPKGVHG ELLNHQDASE SEECFMAFAR VFSGVLRAGQ KVFVLSALYD PLKGDAVQKH VQEIELQYLY
0501: EMLGQGLRPV ASVSAGNVVA IQGLGQHILK SATLSSTKNC WPFSSMMFQV SPMLKVAIEP ANPTDLGALV KGIKLLNRAD PFVEYTVTHR GEHILAAAGE
0601: VHLERCKKDL EERFAKVKLV VSDPLVSFKE TIEGEGAGLL EGLKAPHAFV ERTTPNGRCT VRVQVLRLPN ALTKVLQESD QLLGQIMEGK TSKRNAMLNP
0701: QISQDDCDSV AMLRQRMVSA IDSELEAISE QVDKEKLQKC RKTWLGYLKR IWSLGPWQVG PNFLLLPDVE SSDGVITMED GRQGILVRGR ADFSERLGFV
0801: SGSDAEANHT PDSSKSSADT PESLHLESVA LRNSILSGFQ FATNAGPLCD EPMWGLAFII EPYIFADNSD AAHQSDQYNI FSGQVITAVK EACRAAVLQN
0901: NPRLVEGMYF CELTTPTPQL GSTYAVLGRR RAKILKEEMQ EGTSVFTVHA YLPVAESIGF SSQLRTLTSG AASALLVLSH WDAIQEDPFF VPKSQEEIEE
1001: FGDGASIGPN LAKKLMNSVR RRKGLHVEEK VVEHGTKQRT LSRKT
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.