Factsheet for Bra033543.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32224	Canola	cytosol	55.71	98.45
CDY32225	Canola	nucleus	37.8	97.18
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	49.45	93.56
AT3G22980.2	Thale cress	cytosol	90.88	81.48
Solyc11g071770.1.1	Tomato	cytosol	71.87	63.87
PGSC0003DMT400007735	Potato	cytosol	71.54	63.64
VIT_04s0044g01790.t01	Wine grape	cytosol	71.98	63.59
KRG94823	Soybean	cytosol	70.11	62.43
KRH40894	Soybean	cytosol	22.2	58.38
GSMUA_Achr2P17400_001	Banana	cytosol	50.11	55.34
Os03t0650700-01	Rice	cytosol	57.69	51.02
TraesCS5B01G373200.1	Wheat	cytosol	58.24	50.72
TraesCS5D01G380500.1	Wheat	cytosol	57.91	50.43
TraesCS5A01G370800.1	Wheat	cytosol	57.8	50.33
KXG37923	Sorghum	cytosol	56.92	49.57
Zm00001d033505_P001	Maize	cytosol	56.81	49.52
KXG30393	Sorghum	nucleus	45.93	47.39
Os02t0543300-00	Rice	mitochondrion	50.0	45.27
HORVU5Hr1G092260.1	Barley	nucleus, plastid	57.58	44.94
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	46.37	42.63
TraesCS1B01G062700.1	Wheat	cytosol	46.92	42.45
TraesCS1D01G049600.1	Wheat	cytosol	43.3	41.13
HORVU1Hr1G009320.1	Barley	nucleus	33.96	34.56
Bra010782.1-P	Field mustard	cytosol	28.68	30.96
Bra017279.1-P	Field mustard	cytosol	29.12	30.18
Bra010781.1-P	Field mustard	cytosol	18.02	29.71
Bra020542.1-P	Field mustard	cytosol	28.9	27.83
Bra024798.1-P	Field mustard	cytosol	25.05	23.17
Bra030642.1-P	Field mustard	cytosol	25.05	23.1
Bra027021.1-P	Field mustard	plastid	15.6	18.32
Bra004884.1-P	Field mustard	plastid	14.07	16.95
Bra028444.1-P	Field mustard	mitochondrion	11.54	15.88
Bra028651.1-P	Field mustard	plastid	11.32	15.06
Bra021694.1-P	Field mustard	mitochondrion	10.44	14.57
Bra022824.1-P	Field mustard	mitochondrion	9.89	14.26
Bra008811.1-P	Field mustard	plastid	10.33	13.95

Protein Annotations

MapMan:17.1.2.2.3.4	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.40.50.300	Gene3D:3.90.1430.10
EnsemblPlantsGene:Bra033543	EnsemblPlants:Bra033543.1	EnsemblPlants:Bra033543.1-P	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:IPR000795	InterPro:IPR014721	UniProt:M4EXK6	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF12	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf
UniParc:UPI00025448AF	SEG:seg	:	:	:	:

Description

AT3G22980 (E=8e-238) | elongation factor Tu family protein

Coordinates

chrA01:-:11237474..11240317

Molecular Weight (calculated)

100837.0 Da

IEP (calculated)

5.080

GRAVY (calculated)

-0.207

Length

910 amino acids

Sequence
(BLAST)

001: MDYLDEEQRR AITMKSSSIS LGYKDYSLNL LDSPGHMDFC SEVSTAARLS DGALVLVDAV EGVHIQTHAV LRQAWIEKLT HCLVLNKIDR LICELRLSPM
101: EAYTRLIRIV HEVNGIVSAY KSEKYLSDVD SILASPSGEI TDESLELLED DEEVTFQPQK GNVVFVCALD GWGFGVSEFA NFYASRLGAN ADTLQKSLWG
201: PRYYIPKTKM IVGKKSLSAG SKTNPMFVEF VLEPLWEVLD PGSDGAVLEK VIKSFNLIIP PSELQNKDPK NLRRSVMSRW LPLSDAVLSM AVKHLPDPIS
301: AQAYRIPRLV PERKVNDVDS SVLAEAELVR RSIEACDSSP DSPCVVFVSK MFAMPMKMIP QGGDHRERMN GLNDDDSNSE SDECFLAFAR IFSGVLRAGQ
401: RVFVISSLYD PLKGEKYIQE AQLHSIYLMM GQGLKPVNEV SPTLRVAIEP SDPSDMSALM KGLRLLNRAD PFVEITVSAR GEHVLAAAGE VHLERCIKDL
501: SDRFARVNIE VSSPLVSYRE TVEGDGSNLL ENLTSLSLDY VEKRTPNGRC VIRVHVMKLP HSLTKLLDEN TDLLGDVIGG KGSHKLESQS PSLEENVDPV
601: EVLKSQLVEA GVSSSSETEN DREKCKAEWA KLLKRIWALG PREKGPNILF TPDGKRICVD GSIPVRGSPH VSHRLGFTED PIETPSDSAL YSEAVTLESS
701: IVSGFQLATA SGPLCDEPMW GLAFTIESHL AEDLETEKQP ENFGIFTGQV MTAVKDACRA AVLQTNPRIV EAMYFCELNT APEYLGPMYA VLSRRRARVL
801: KEEMQEGSSL FTVHAYVPVS ESFGFADELR KGTSGGASAL MVLSHWEMLE EDPFFVPKTE QEIEEFGDGA SVLPNTARKL INAVRRRKGL HVEEKVVQHA
901: TKQRTLARKV

Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)

0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV

Arabidopsis Description

Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.