Factsheet for GSMUA_Achr10P21400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70526	Canola	nucleus	9.86	89.41
CDY49974	Canola	nucleus	9.73	88.24
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	88.07	88.18
TraesCS7A01G288600.1	Wheat	cytosol	13.88	87.7
TraesCS2A01G234500.1	Wheat	cytosol	14.14	87.2
KRH13696	Soybean	nucleus	95.33	87.19
KRH43759	Soybean	nucleus	95.2	87.07
CDY49975	Canola	cytosol	45.01	86.97
KXG37185	Sorghum	cytosol	95.07	86.95
KXG37183	Sorghum	cytosol	95.07	86.95
OQU75622	Sorghum	cytosol	38.13	86.73
Zm00001d034773_P001	Maize	cytosol	94.81	86.71
Zm00001d034776_P001	Maize	cytosol	94.81	86.71
EES01455	Sorghum	cytosol	94.81	86.71
Zm00001d034771_P002	Maize	cytosol	94.68	86.6
Zm00001d012770_P001	Maize	plastid	94.68	86.6
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	14.01	86.4
Solyc08g062920.2.1	Tomato	nucleus, plastid	92.35	85.99
TraesCS3D01G220900.1	Wheat	golgi	93.77	85.77
TraesCS5D01G509800.1	Wheat	cytosol	49.68	85.68
TraesCS5B01G509600.1	Wheat	cytosol, golgi	93.64	85.65
VIT_19s0027g00760.t01	Wine grape	cytosol	94.68	85.58
TraesCS5D01G509700.1	Wheat	cytosol	91.57	85.58
TraesCS3A01G232300.1	Wheat	cytosol, golgi	93.51	85.53
TraesCS3B01G261500.1	Wheat	cytosol	93.51	85.53
TraesCS5D01G509600.1	Wheat	cytosol	93.51	85.53
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	93.51	85.53
HORVU3Hr1G057880.1	Barley	cytosol	93.51	85.53
HORVU3Hr1G057890.1	Barley	cytosol	93.51	85.53
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	93.51	85.53
TraesCS5B01G509500.1	Wheat	cytosol, golgi, nucleus	93.51	85.53
GSMUA_Achr4P01020_001	Banana	cytosol	96.37	85.5
TraesCS7D01G449300.1	Wheat	cytosol	93.26	85.29
HORVU7Hr1G106150.1	Barley	cytosol	93.13	85.17
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	93.13	85.17
TraesCS7B01G362600.1	Wheat	cytosol	93.13	85.17
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	93.13	85.17
TraesCS5B01G509700.1	Wheat	cytosol, golgi	93.0	85.05
Bra010782.1-P	Field mustard	cytosol	92.61	84.7
AT1G56070.2	Thale cress	cytosol	92.61	84.7
CDX90241	Canola	cytosol, extracellular	86.51	84.32
Bra010781.1-P	Field mustard	cytosol	60.31	84.24
CDY70516	Canola	cytosol	55.38	83.89
Os01t0742200-01	Rice	cytosol, nucleus	88.98	83.05
CDY05533	Canola	cytosol	69.78	82.39
CDY32072	Canola	cytosol	68.61	81.76
AT3G12915.2	Thale cress	cytosol	83.27	81.47
CDY24982	Canola	endoplasmic reticulum, vacuole	88.2	81.15
Bra017279.1-P	Field mustard	cytosol	92.35	81.09
HORVU5Hr1G116710.1	Barley	cytosol	61.22	80.41
CDY40423	Canola	cytosol	81.58	79.92
TraesCS4A01G363900.1	Wheat	plastid	67.96	79.76
Bra020542.1-P	Field mustard	cytosol	92.35	75.34
KRH13693	Soybean	mitochondrion	76.52	71.34
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	39.56	69.63
KRH13692	Soybean	cytosol, mitochondrion	63.68	68.67
KRH43761	Soybean	cytosol, nucleus, plastid	16.73	64.5
Zm00001d020342_P001	Maize	mitochondrion	32.68	63.16
TraesCS1D01G023700.1	Wheat	cytosol	64.59	59.22
TraesCS1A01G027600.1	Wheat	cytosol	61.87	56.45
TraesCS1D01G026800.1	Wheat	cytosol	49.81	55.17
TraesCSU01G002600.1	Wheat	cytosol	60.96	54.46
TraesCS1B01G033500.1	Wheat	cytosol	26.72	51.12
HORVU1Hr1G003960.9	Barley	cytosol	59.4	49.67
CDY54261	Canola	nucleus	14.27	47.83
Os05t0467501-00	Rice	cytosol	27.63	46.71
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	38.65	30.69
GSMUA_Achr2P17400_001	Banana	cytosol	29.18	27.31
GSMUA_Achr5P13570_001	Banana	mitochondrion	21.4	22.79
GSMUA_Achr10P...	Banana	cytosol	19.46	21.64
GSMUA_Achr8P27160_001	Banana	mitochondrion	16.6	19.1
GSMUA_Achr5P14760_001	Banana	plastid	16.21	18.36
GSMUA_Achr10P...	Banana	mitochondrion	15.95	18.22
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	13.1	17.91

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	Gene3D:3.90.1430.10
MapMan:35.1	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr10G21400_001
EnsemblPlants:GSMUA_Achr10P21400_001	EnsemblPlants:GSMUA_Achr10T21400_001	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	UniProt:M0RK65
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI000295F09D
SEG:seg	:	:	:	:	:

Description

Elongation factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G21400_001]

Coordinates

chr10:-:27021283..27025199

Molecular Weight (calculated)

85784.8 Da

IEP (calculated)

5.887

GRAVY (calculated)

-0.214

Length

771 amino acids

Sequence
(BLAST)

001: MVKFTAEELR KIMDLKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR QDEAERGITI KSTGISLYYE MTDESLKNYK GERVGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CVEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFQR VIENANVIMA TYEDVLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA AKFGSTGSPT CKRGFVQFCY EPIRQIISTC MNDQKDKLWP MLQKLGVTMK SDEKDLIGKA LMKRVMQTWL
301: PASSALLEMM IFHLPSPAKA QRYRVENLYE GPLDDIYANA IRNCDPEGPL MLYVSKMIPA SDKGRFFAFG RVFSGKVSTG LKVRIMGPNY VPGQKKDLYV
401: KSVQRTVIWM GKKQESVEDV PCGNTVAMVG LDQFITKNAT LTNEKETDAH PIRAMKFSVS PVVRVAVQCK VASDLPKLVE GLKRLAKSDP MVVCTIEESG
501: EHIVAGAGEL HLEICLKDLQ EDFMGGAEII VSDPVVSFRE TVLEKSCRTV MSKSPNKHNR LYMEARPMEE GLAEAIDDGR IGPRDDPKAR SKILSEEFGW
601: DKDLAKKIWC FGPETTGPNM VVDMCKGVQY LNEIKDSVVA GFQWASKEGA PRLLEPVYLV EIQAPEQALG GIYGVLNQKR GHVFEEMQRP GTPLYNIKAY
701: LPVIESFGFS STLRAATSGQ AFPQCVFDHW DMMSSDPLEP GSQAGQLVSD IRKRKGLKEQ MTPLSEFEDK L

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.