Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75622 | Sorghum | cytosol | 73.93 | 87.02 |
| TraesCS5D01G509800.1 | Wheat | cytosol | 87.97 | 78.52 |
| KRH43761 | Soybean | cytosol, nucleus, plastid | 36.59 | 73.0 |
| CDY40423 | Canola | cytosol | 100.0 | 50.7 |
| CDX90241 | Canola | cytosol, extracellular | 100.0 | 50.44 |
| Solyc08g062910.2.1 | Tomato | cytosol, extracellular, nucleus, unclear | 94.24 | 48.83 |
| CDY24982 | Canola | endoplasmic reticulum, vacuole | 99.75 | 47.49 |
| AT1G56070.2 | Thale cress | cytosol | 96.74 | 45.79 |
| Os05t0467501-00 | Rice | cytosol | 51.88 | 45.39 |
| Solyc08g062920.2.1 | Tomato | nucleus, plastid | 93.98 | 45.29 |
| KRH13696 | Soybean | nucleus | 95.24 | 45.08 |
| GSMUA_Achr10P... | Banana | cytosol | 86.97 | 45.01 |
| KRH43759 | Soybean | nucleus | 94.74 | 44.84 |
| AT3G12915.2 | Thale cress | cytosol | 88.47 | 44.8 |
| Zm00001d034773_P001 | Maize | cytosol | 92.98 | 44.01 |
| KXG37185 | Sorghum | cytosol | 92.98 | 44.01 |
| KXG37183 | Sorghum | cytosol | 92.98 | 44.01 |
| Zm00001d034776_P001 | Maize | cytosol | 92.98 | 44.01 |
| Zm00001d034771_P002 | Maize | cytosol | 92.73 | 43.89 |
| Zm00001d012770_P001 | Maize | plastid | 92.73 | 43.89 |
| TraesCS3A01G232300.1 | Wheat | cytosol, golgi | 92.73 | 43.89 |
| EES01455 | Sorghum | cytosol | 92.73 | 43.89 |
| VIT_19s0027g00760.t01 | Wine grape | cytosol | 93.73 | 43.85 |
| TraesCS3D01G220900.1 | Wheat | golgi | 92.23 | 43.65 |
| TraesCS3B01G261500.1 | Wheat | cytosol | 92.23 | 43.65 |
| HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 91.98 | 43.53 |
| TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 91.98 | 43.53 |
| TraesCS4A01G363800.1 | Wheat | cytosol, nucleus, plastid | 91.98 | 43.53 |
| TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 91.98 | 43.53 |
| TraesCS5D01G509600.1 | Wheat | cytosol | 91.98 | 43.53 |
| HORVU7Hr1G106150.1 | Barley | cytosol | 91.98 | 43.53 |
| TraesCS7A01G461100.1 | Wheat | cytosol, nucleus, unclear | 91.98 | 43.53 |
| TraesCS7D01G449300.1 | Wheat | cytosol | 91.98 | 43.53 |
| TraesCS7B01G362600.1 | Wheat | cytosol | 91.98 | 43.53 |
| TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 91.73 | 43.42 |
| HORVU3Hr1G057890.1 | Barley | cytosol | 91.73 | 43.42 |
| HORVU3Hr1G057880.1 | Barley | cytosol | 91.73 | 43.42 |
| TraesCS4A01G363700.1 | Wheat | cytosol, golgi, unclear | 91.73 | 43.42 |
| Os01t0742200-01 | Rice | cytosol, nucleus | 88.22 | 42.62 |
| GSMUA_Achr4P01020_001 | Banana | cytosol | 92.73 | 42.58 |
| TraesCS5D01G509700.1 | Wheat | cytosol | 87.97 | 42.55 |
| CDY05533 | Canola | cytosol | 65.16 | 39.82 |
| CDY32072 | Canola | cytosol | 64.41 | 39.72 |
| KRH13693 | Soybean | mitochondrion | 77.69 | 37.48 |
| KRH13692 | Soybean | cytosol, mitochondrion | 57.14 | 31.89 |
| TraesCS1D01G023700.1 | Wheat | cytosol | 67.17 | 31.87 |
| GSMUA_Achr6P22520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 33.83 | 30.82 |
| TraesCS1A01G027600.1 | Wheat | cytosol | 64.66 | 30.53 |
| TraesCSU01G002600.1 | Wheat | cytosol | 63.66 | 29.43 |
| TraesCS4A01G363900.1 | Wheat | plastid | 47.62 | 28.92 |
| CDY10337 | Canola | cytosol | 32.33 | 27.22 |
| HORVU1Hr1G003960.9 | Barley | cytosol | 62.41 | 27.01 |
| TraesCS1D01G026800.1 | Wheat | cytosol | 44.11 | 25.29 |
| CDY32224 | Canola | cytosol | 30.58 | 23.69 |
| CDY69302 | Canola | cytosol | 16.79 | 21.0 |
| HORVU5Hr1G116710.1 | Barley | cytosol | 26.82 | 18.23 |
| CDY10688 | Canola | cytosol | 37.09 | 16.97 |
| CDY70516 | Canola | cytosol | 21.55 | 16.9 |
| CDY15566 | Canola | cytosol | 32.58 | 15.61 |
| TraesCS7A01G288600.1 | Wheat | cytosol | 4.26 | 13.93 |
| CDY09982 | Canola | nucleus | 34.09 | 13.75 |
| TraesCS2A01G234500.1 | Wheat | cytosol | 4.26 | 13.6 |
| TraesCS6A01G189500.1 | Wheat | cytosol, nucleus, plastid | 4.26 | 13.6 |
| CDX84803 | Canola | mitochondrion | 19.55 | 12.5 |
| CDY54484 | Canola | mitochondrion | 19.8 | 11.81 |
| CDY19061 | Canola | mitochondrion | 19.8 | 11.81 |
| CDY46917 | Canola | plastid | 22.81 | 11.74 |
| CDY31838 | Canola | plastid | 22.81 | 11.74 |
| CDX91105 | Canola | plastid | 19.55 | 11.57 |
| CDY65992 | Canola | plastid | 19.55 | 11.57 |
| CDY09816 | Canola | plastid | 19.55 | 11.56 |
| CDX74705 | Canola | plastid | 21.05 | 11.13 |
| CDY18957 | Canola | plastid | 21.05 | 11.11 |
| CDX85635 | Canola | plastid | 19.55 | 11.02 |
| CDX67441 | Canola | plastid | 18.55 | 10.79 |
| CDY65319 | Canola | endoplasmic reticulum, plastid, vacuole | 18.55 | 10.76 |
| CDY44781 | Canola | plastid | 18.05 | 10.67 |
| CDY40739 | Canola | plastid | 18.05 | 10.53 |
| CDX78349 | Canola | cytosol | 3.26 | 5.63 |
| CDY71233 | Canola | mitochondrion, nucleus | 7.77 | 5.56 |
| CDY70689 | Canola | cytosol | 7.27 | 5.36 |
| TraesCS1B01G033500.1 | Wheat | cytosol | 3.76 | 3.72 |
| Zm00001d020342_P001 | Maize | mitochondrion | 1.0 | 1.0 |
| CDY70526 | Canola | nucleus | 0.0 | 0.0 |
| CDY54261 | Canola | nucleus | 0.0 | 0.0 |
| CDY49974 | Canola | nucleus | 0.0 | 0.0 |
| CDY32225 | Canola | nucleus | 0.0 | 0.0 |
| CDY23967 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078IGC4 | UniProt:A0A078IGC4 | EnsemblPlants:CDY49975 |
| ProteinID:CDY49975 | ProteinID:CDY49975.1 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00094172001 | InterPro:G_TR_CS |
| InterPro:IPR000795 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PRINTS:PR00315 | ScanProsite:PS00301 |
| PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF11 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:TF_GTP-bd_dom | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI0004EDF1B6 | : | : |
Description
BnaC03g76150DBnaC03g76150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGC4]
Coordinates
chrLK032872:-:74130..76113
Molecular Weight (calculated)
44501.9 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.122
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVIAHVDHG KSTLTDSLVA AAGIIAQEVA GDVRMTDTRA DEAERGITIK STGISLYYEM TDASLKSFTG ARDGNEYLIN LIDSPGHVDF SSEVTAALRI
101: TDGALVVVDC IEGVCVQTET VLRQALGERI RPVLTVNKMD RCFLELQVDG EEAYQTFQRV IENANVIMAT YEDPLLGDVQ VYPEKGTVAF SAGLHGWAFT
201: LTNFAKMYAS KFGVDETKMM ERLWGENFFD PATRKWSSKN TGSATCKRGF VQFCYEPIKQ IIATCMNDQK DKLWPMLQKL GVQMKSDEKE LMGKPLMKRV
301: MQTWLPASTA LLEMMIFHLP SPHTAQRYRV ENLFFAFGRV FSGKVSTGMK VRIMGPNFVP GEKKDLYVKS VQRTVIWMGK RQETVEDVPC GNTVAMVGL
101: TDGALVVVDC IEGVCVQTET VLRQALGERI RPVLTVNKMD RCFLELQVDG EEAYQTFQRV IENANVIMAT YEDPLLGDVQ VYPEKGTVAF SAGLHGWAFT
201: LTNFAKMYAS KFGVDETKMM ERLWGENFFD PATRKWSSKN TGSATCKRGF VQFCYEPIKQ IIATCMNDQK DKLWPMLQKL GVQMKSDEKE LMGKPLMKRV
301: MQTWLPASTA LLEMMIFHLP SPHTAQRYRV ENLFFAFGRV FSGKVSTGMK VRIMGPNFVP GEKKDLYVKS VQRTVIWMGK RQETVEDVPC GNTVAMVGL
001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
Arabidopsis Description
LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.