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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70526 Canola nucleus 96.47 96.47
CDY54261 Canola nucleus 96.47 35.65
CDY70516 Canola cytosol 98.82 16.5
HORVU5Hr1G116710.1 Barley cytosol 89.41 12.95
CDY32072 Canola cytosol 96.47 12.67
CDY05533 Canola cytosol 96.47 12.56
TraesCS4A01G363900.1 Wheat plastid 84.71 10.96
CDX90241 Canola cytosol, extracellular 98.82 10.62
CDY24982 Canola endoplasmic reticulum, vacuole 98.82 10.02
GSMUA_Achr10P... Banana cytosol 88.24 9.73
AT3G12915.2 Thale cress cytosol 89.41 9.64
TraesCS5D01G509700.1 Wheat cytosol 89.41 9.21
Solyc08g062920.2.1 Tomato nucleus, plastid 89.41 9.18
AT1G56070.2 Thale cress cytosol 90.59 9.13
KXG37185 Sorghum cytosol 90.59 9.13
KXG37183 Sorghum cytosol 90.59 9.13
KRH43759 Soybean nucleus 90.59 9.13
KRH13696 Soybean nucleus 90.59 9.13
EES01455 Sorghum cytosol 90.59 9.13
Zm00001d020342_P001 Maize mitochondrion 42.35 9.02
Zm00001d034776_P001 Maize cytosol 89.41 9.02
TraesCS5B01G509500.1 Wheat cytosol, golgi, nucleus 89.41 9.02
Zm00001d034773_P001 Maize cytosol 89.41 9.02
HORVU5Hr1G116580.1 Barley cytosol, plasma membrane 89.41 9.02
Zm00001d012770_P001 Maize plastid 89.41 9.02
TraesCS5D01G509600.1 Wheat cytosol 89.41 9.02
TraesCS4A01G363800.1 Wheat cytosol, nucleus, plastid 89.41 9.02
TraesCS5B01G509600.1 Wheat cytosol, golgi 89.41 9.02
TraesCS1B01G033500.1 Wheat cytosol 42.35 8.93
Zm00001d034771_P002 Maize cytosol 88.24 8.9
HORVU3Hr1G057890.1 Barley cytosol 88.24 8.9
HORVU3Hr1G057880.1 Barley cytosol 88.24 8.9
TraesCS3D01G220900.1 Wheat golgi 87.06 8.78
TraesCS3B01G261500.1 Wheat cytosol 87.06 8.78
TraesCS3A01G232300.1 Wheat cytosol, golgi 87.06 8.78
CDY32225 Canola nucleus 36.47 8.76
TraesCS7B01G362600.1 Wheat cytosol 85.88 8.66
TraesCS7D01G449300.1 Wheat cytosol 85.88 8.66
VIT_19s0027g00760.t01 Wine grape cytosol 85.88 8.56
TraesCS7A01G461100.1 Wheat cytosol, nucleus, unclear 84.71 8.54
HORVU7Hr1G106150.1 Barley cytosol 84.71 8.54
TraesCS5B01G509700.1 Wheat cytosol, golgi 84.71 8.54
TraesCS4A01G363700.1 Wheat cytosol, golgi, unclear 84.71 8.54
Solyc08g062910.2.1 Tomato cytosol, extracellular, nucleus, unclear 75.29 8.31
GSMUA_Achr4P01020_001 Banana cytosol 84.71 8.29
CDY70689 Canola cytosol 44.71 7.02
KRH13692 Soybean cytosol, mitochondrion 57.65 6.85
CDY71233 Canola mitochondrion, nucleus 44.71 6.81
KRH13693 Soybean mitochondrion 63.53 6.53
Os01t0742200-01 Rice cytosol, nucleus 58.82 6.05
CDY23967 Canola cytosol 7.06 5.17
TraesCS1D01G026800.1 Wheat cytosol 41.18 5.03
TraesCS1D01G023700.1 Wheat cytosol 47.06 4.76
CDY15566 Canola cytosol 44.71 4.56
TraesCSU01G002600.1 Wheat cytosol 42.35 4.17
TraesCS1A01G027600.1 Wheat cytosol 40.0 4.02
CDY09982 Canola nucleus 44.71 3.84
CDY10688 Canola cytosol 36.47 3.56
HORVU1Hr1G003960.9 Barley cytosol 31.76 2.93
CDY31838 Canola plastid 16.47 1.81
CDY46917 Canola plastid 16.47 1.81
CDY40423 Canola cytosol 15.29 1.65
GSMUA_Achr6P22520_001 Banana endoplasmic reticulum, extracellular, vacuole 7.06 1.37
CDX74705 Canola plastid 11.76 1.32
CDY18957 Canola plastid 11.76 1.32
KRH43761 Soybean cytosol, nucleus, plastid 2.35 1.0
CDX84803 Canola mitochondrion 7.06 0.96
CDY54484 Canola mitochondrion 7.06 0.9
CDY19061 Canola mitochondrion 7.06 0.9
CDY65992 Canola plastid 7.06 0.89
CDX91105 Canola plastid 7.06 0.89
CDY09816 Canola plastid 7.06 0.89
CDX85635 Canola plastid 7.06 0.85
CDY44781 Canola plastid 5.88 0.74
CDY40739 Canola plastid 5.88 0.73
CDX67441 Canola plastid 4.71 0.58
CDY65319 Canola endoplasmic reticulum, plastid, vacuole 4.71 0.58
CDX78349 Canola cytosol 1.18 0.43
CDY10337 Canola cytosol 1.18 0.21
CDY32224 Canola cytosol 1.18 0.19
TraesCS6A01G189500.1 Wheat cytosol, nucleus, plastid 0.0 0.0
TraesCS7A01G288600.1 Wheat cytosol 0.0 0.0
TraesCS5D01G509800.1 Wheat cytosol 0.0 0.0
OQU75622 Sorghum cytosol 0.0 0.0
Os05t0467501-00 Rice cytosol 0.0 0.0
CDY69302 Canola cytosol 0.0 0.0
CDY49975 Canola cytosol 0.0 0.0
TraesCS2A01G234500.1 Wheat cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY49974EnsemblPlantsGene:GSBRNA2T00094170001Gene3D:3.30.70.240InterPro:EFG_III/VInterPro:EFG_V-likePANTHER:PTHR42908
PANTHER:PTHR42908:SF11PFAM:PF00679ProteinID:CDY49974ProteinID:CDY49974.1SUPFAM:SSF54980UniParc:UPI0004EE4C1B
UniProt:A0A078IKL7MapMan:35.1::::
Description
BnaC03g76140DBnaC03g76140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKL7]
Coordinates
chrLK032872:-:72971..73228
Molecular Weight (calculated)
9575.5 Da
IEP (calculated)
5.795
GRAVY (calculated)
-0.401
Length
85 amino acids
Sequence
(BLAST)
1: MQRPGTPLYN IKAYLPVVES FGFSSQLRAA TSGQAFPQCV FDHWEMMMSD PLEAGSQAST LVTDIRKRKG MKEQMTPLSD FEDKL
Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)
001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
Arabidopsis Description
LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.