CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008811.1-P	Field mustard	plastid	97.63	97.63
CDY65992	Canola	plastid	97.48	97.48
CDY09816	Canola	plastid	97.48	97.33
AT5G13650.2	Thale cress	plastid	95.55	95.27
CDX85635	Canola	plastid	98.37	93.64
Solyc03g058190.2.1	Tomato	plastid	82.05	82.29
KRH71976	Soybean	nucleus	80.56	80.33
VIT_08s0007g08290.t01	Wine grape	plastid	79.97	79.85
KRH33159	Soybean	nucleus	79.82	79.12
KXG30054	Sorghum	mitochondrion, plastid	75.07	75.41
GSMUA_Achr5P14760_001	Banana	plastid	76.11	75.33
Zm00001d015929_P002	Maize	plastid	74.93	75.26
Os02t0285800-01	Rice	plasma membrane	74.63	75.19
TraesCS6A01G192800.1	Wheat	plastid	73.15	73.15
TraesCS6D01G183500.1	Wheat	plastid	72.85	73.07
TraesCS6B01G224800.2	Wheat	plastid	73.0	72.89
HORVU6Hr1G050160.1	Barley	plastid	51.63	65.29
CDX84803	Canola	mitochondrion	36.35	39.26
CDY19061	Canola	mitochondrion	38.28	38.56
CDY54484	Canola	mitochondrion	37.83	38.12
CDY23967	Canola	cytosol	6.53	37.93
CDY44781	Canola	plastid	23.15	23.11
CDY40739	Canola	plastid	23.0	22.66
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	22.4	21.95
CDX67441	Canola	plastid	22.26	21.87
CDY49975	Canola	cytosol	11.57	19.55
CDY10337	Canola	cytosol	12.31	17.51
CDX74705	Canola	plastid	19.58	17.48
CDY18957	Canola	plastid	19.58	17.46
CDX78349	Canola	cytosol	5.93	17.32
CDY69302	Canola	cytosol	7.72	16.3
CDY31838	Canola	plastid	17.06	14.84
CDY46917	Canola	plastid	17.06	14.84
CDX90241	Canola	cytosol, extracellular	17.36	14.79
CDY40423	Canola	cytosol	16.91	14.49
CDY24982	Canola	endoplasmic reticulum, vacuole	17.8	14.32
CDY32224	Canola	cytosol	10.53	13.79
CDY10688	Canola	cytosol	16.62	12.84
CDY15566	Canola	cytosol	14.69	11.88
CDY09982	Canola	nucleus	17.06	11.63
CDY70516	Canola	cytosol	8.46	11.2
CDY70689	Canola	cytosol	8.16	10.17
CDY71233	Canola	mitochondrion, nucleus	8.01	9.68
CDY05533	Canola	cytosol	9.35	9.65
CDY32072	Canola	cytosol	9.2	9.58
CDY70526	Canola	nucleus	0.89	7.06
CDY49974	Canola	nucleus	0.89	7.06
CDY54261	Canola	nucleus	2.23	6.52
CDY32225	Canola	nucleus	3.26	6.21

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
GO:A0A078DP92	InterPro:BipA_V	EnsemblPlants:CDX91105	ProteinID:CDX91105	ProteinID:CDX91105.1	InterPro:EFG_III/V
InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00151888001	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0004EDD87E	SEG:seg	:	:	:

Description

BnaC02g04920D

Coordinates

chrLK031865:-:795360..798878

Molecular Weight (calculated)

74382.8 Da

IEP (calculated)

7.498

GRAVY (calculated)

-0.234

Length

674 amino acids

Sequence
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQQVL GLTFASALKP GGALRFRPRR RPLHRPITCS VSPSTAEPSS EVKKKKTLVR RNDVRNIAIV ALVDHGKTTL
101: VDSMLRQAKV FRDNQVMQER IMDSNDLERE RGITILSKNT SITYKNTKVN IIDTPGHSDF GGEVERVLNM VDGVLLVVDS VEGPMPQTRF VLKKALEFGH
201: AVVVVVNKID RPSARPEFVV NSTFELFIEL NATDEQCDFQ AIYASGIKGK AGLDPDDLAE DLGPLFEAII RCVPGPNIEK DGALQMLATN IEYDEHKGRI
301: AIGRLHAGAL RKGMDVRVCT SEDSCRFARV SELFVYEKFY RVPADTVEAG DICAVCGIDD IQIGETIADK VHGKPLPTIK VEEPTVKMSF SVNTSPFSGR
401: EGKYVTSRNL RDRLNRELER NLAMKVEDGE TADTFIISGR GTLHITILIE NMQGYEFMVG PPKVINKRVN DKLLEPYEVA TVEVPENHMG PVVELLGRRR
501: GQMFDMQGVG SEGTVFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS SQERGQMFVG AGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VVLDTPLTYS LDDCIEYIEE DELVEVTPLS IRMCKNPKMA KKGR

Best Arabidopsis Sequence Match ( AT5G13650.1 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASE VKKKQLDRRD NVRNIAIVAH VDHGKTTLVD
101: SMLRQAKVFR DNQVMQERIM DSNDLERERG ITILSKNTSI TYKNTKVNII DTPGHSDFGG EVERVLNMVD GVLLVVDSVE GPMPQTRFVL KKALEFGHAV
201: VVVVNKIDRP SARPEFVVNS TFELFIELNA TDEQCDFQAI YASGIKGKAG LSPDDLAEDL GPLFEAIIRC VPGPNIEKDG ALQMLATNIE YDEHKGRIAI
301: GRLHAGVLRK GMDVRVCTSE DSCRFARVSE LFVYEKFYRV PTDSVEAGDI CAVCGIDNIQ IGETIADKVH GKPLPTIKVE EPTVKMSFSV NTSPFSGREG
401: KYVTSRNLRD RLNRELERNL AMKVEDGETA DTFIVSGRGT LHITILIENM RREGYEFMVG PPKVINKRVN DKLLEPYEIA TVEVPEAHMG PVVELLGKRR
501: GQMFDMQGVG SEGTTFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS AQERGQMFVG SGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VILDTPLTYS LDDCIEYIEE DELVEVTPSS IRMCKNQKMA KKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.