Factsheet for Os02t0285800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30054	Sorghum	mitochondrion, plastid	91.18	90.91
Zm00001d015929_P002	Maize	plastid	89.99	89.72
TraesCS6D01G183500.1	Wheat	plastid	87.14	86.76
TraesCS6B01G224800.2	Wheat	plastid	87.29	86.52
TraesCS6A01G192800.1	Wheat	plastid	87.14	86.5
GSMUA_Achr5P14760_001	Banana	plastid	79.67	78.27
VIT_08s0007g08290.t01	Wine grape	plastid	77.43	76.74
HORVU6Hr1G050160.1	Barley	plastid	60.84	76.36
Solyc03g058190.2.1	Tomato	plastid	76.38	76.04
KRH71976	Soybean	nucleus	76.38	75.59
AT5G13650.2	Thale cress	plastid	76.23	75.44
Bra008811.1-P	Field mustard	plastid	75.93	75.37
CDY65992	Canola	plastid	75.93	75.37
CDY09816	Canola	plastid	75.93	75.26
CDX91105	Canola	plastid	75.19	74.63
KRH33159	Soybean	nucleus	75.64	74.41
CDX85635	Canola	plastid	75.34	71.19
Os01t0752700-01	Rice	mitochondrion	39.91	39.67
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	7.47	35.46
Os06t0144800-01	Rice	mitochondrion	23.02	23.23
Os03t0565500-01	Rice	mitochondrion	18.09	15.98
Os01t0723000-01	Rice	cytosol, nucleus, plasma membrane	19.43	15.24
Os01t0742200-01	Rice	cytosol, nucleus	18.68	15.13
Os04t0538100-01	Rice	plasma membrane	7.77	13.47
Os05t0467501-00	Rice	cytosol	9.12	13.38
Os06t0608300-01	Rice	nucleus	17.34	11.63
Os02t0543300-00	Rice	mitochondrion	17.04	11.34
Os03t0650700-01	Rice	cytosol	17.34	11.27

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:4329037	ProteinID:BAD21496.1	ProteinID:BAF08487.1	ProteinID:BAS78148.1	ProteinID:BAS78149.1	InterPro:BipA_V
InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0000302	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0010468	GO:GO:0016787
GO:GO:0031425	InterPro:G_TR_CS	InterPro:IPR000795	EnsemblPlantsGene:Os02g0285800	EnsemblPlants:Os02t0285800-01	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	UniProt:Q6KA61	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0000377BFC	RefSeq:XP_015627401.1	SEG:seg	:	:

Description

Similar to GTP-binding protein typA (Tyrosine phosphorylated protein A). (Os02t0285800-01);Similar to predicted protein. (Os02t0285800-02)

Coordinates

chr2:+:10739451..10747067

Molecular Weight (calculated)

73515.3 Da

IEP (calculated)

7.426

GRAVY (calculated)

-0.287

Length

669 amino acids

Sequence
(BLAST)

001: MQMQAATTTT AARRLAPKPQ PQANRCRPSS VSVVAAGRSR RRSARSSLRA SASLDQEVKE RASPAAGKSG QATRRDVRNI AIVAHVDHGK TTLVDSMLRQ
101: AKVFRDNQVV QERIMDSNDL ERERGITILS KNTSITYKGT KINIIDTPGH SDFGGEVERV LNMVEGVLLV VDSVEGPMPQ TRFVLKKALE FGHAVVVVVN
201: KIDRPTARPE FVVNSTFELF IELNATDEQC DFQTVYASGI KGKAGLSPEN LGDDLGPLFE AILRCIPEPR IEKDGALQLL VSNTEYDEHK GRIAIGRLHA
301: GELQRGMEVK VCTPDDACRI SKISELFVYQ NFSRVPVDNV SAGDICAVCG INDIMIGETI ADKVSGTPLP TIKIEEPTVR MSFSINTSPF VGKEGKYVTS
401: RNLRDRLYRE LERNLAMKVE DGETADTFLV SGRGTLHLTI LIENMRREGF EFMIGPPKVI NKTVDGKLQE PYEIAAVEVP EEYMGSVVEL LGKRRGQMVD
501: MQPSGPEGTT LLKYKIPTRG LIGLRNAVLT ASRGTAILNT IFDSYGPWAG DLSSRDQGSL VAFEDGSTTS YALLNAQERG ILFVSPGQDV YKGQIVGIHQ
601: RPGDLAINVC KKKAATNVRS NKETTVVLDE ALSYSLDDCI EFIQEDELVE VTPASIRMCK NPKVSKKNR

Best Arabidopsis Sequence Match ( AT5G13650.1 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASE VKKKQLDRRD NVRNIAIVAH VDHGKTTLVD
101: SMLRQAKVFR DNQVMQERIM DSNDLERERG ITILSKNTSI TYKNTKVNII DTPGHSDFGG EVERVLNMVD GVLLVVDSVE GPMPQTRFVL KKALEFGHAV
201: VVVVNKIDRP SARPEFVVNS TFELFIELNA TDEQCDFQAI YASGIKGKAG LSPDDLAEDL GPLFEAIIRC VPGPNIEKDG ALQMLATNIE YDEHKGRIAI
301: GRLHAGVLRK GMDVRVCTSE DSCRFARVSE LFVYEKFYRV PTDSVEAGDI CAVCGIDNIQ IGETIADKVH GKPLPTIKVE EPTVKMSFSV NTSPFSGREG
401: KYVTSRNLRD RLNRELERNL AMKVEDGETA DTFIVSGRGT LHITILIENM RREGYEFMVG PPKVINKRVN DKLLEPYEIA TVEVPEAHMG PVVELLGKRR
501: GQMFDMQGVG SEGTTFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS AQERGQMFVG SGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VILDTPLTYS LDDCIEYIEE DELVEVTPSS IRMCKNQKMA KKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.