Factsheet for Os04t0538166-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P13570_001	Banana	mitochondrion	90.78	17.68
Zm00001d025948_P001	Maize	plastid	92.2	16.93
Zm00001d002822_P001	Maize	plastid	91.49	16.77
EES12566	Sorghum	plastid	91.49	16.65
HORVU2Hr1G092180.1	Barley	plastid	90.07	16.64
TraesCS2D01G383800.1	Wheat	mitochondrion, plastid	90.07	16.54
TraesCS2B01G404600.1	Wheat	plastid	90.07	16.54
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	90.07	16.54
VIT_00s0323g00080.t01	Wine grape	plastid	90.07	16.39
KRH57341	Soybean	nucleus, plastid	90.07	16.28
Solyc08g079180.2.1	Tomato	plastid	90.78	16.26
PGSC0003DMT400012076	Potato	cytosol, plastid	90.78	16.26
Bra027021.1-P	Field mustard	plastid	89.36	16.26
CDY46917	Canola	plastid	89.36	16.26
CDY31838	Canola	plastid	89.36	16.26
KRH04069	Soybean	nucleus, plastid	90.07	16.14
AT1G62750.1	Thale cress	plastid	89.36	16.09
Os03t0565500-01	Rice	mitochondrion	58.16	10.83
Os02t0285800-01	Rice	plasma membrane	35.46	7.47
Os01t0752700-01	Rice	mitochondrion	34.75	7.28
Os06t0144800-01	Rice	mitochondrion	33.33	7.09
Os01t0742200-01	Rice	cytosol, nucleus	37.59	6.42
Os01t0723000-01	Rice	cytosol, nucleus, plasma membrane	35.46	5.86
Os05t0467501-00	Rice	cytosol	17.73	5.48
Os03t0650700-01	Rice	cytosol	34.75	4.76
Os02t0543300-00	Rice	mitochondrion	31.91	4.48
Os06t0608300-01	Rice	nucleus	26.95	3.81
Os04t0538100-01	Rice	plasma membrane	0.0	0.0
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0N7KJF4	ProteinID:BAS90265.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125
InterPro:G_TR_CS	InterPro:IPR000795	EnsemblPlantsGene:Os04g0538166	EnsemblPlants:Os04t0538166-00	InterPro:P-loop_NTPase	PFAM:PF00009
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43261	PANTHER:PTHR43261:SF1	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	UniParc:UPI0003938AF1	:	:

Description

Similar to Elongation factor G, chloroplastic. (Os04t0538166-00)

Coordinates

chr4:-:26920269..26920691

Molecular Weight (calculated)

16142.3 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.326

Length

141 amino acids

Sequence
(BLAST)

001: CIQHRQVPLQ WHSRHISVIM AHIDAGKTTT TERVLYYTGR NYKIGEVHEG TATMDWMEQE QERGITITSA ATTAFWNKHR INIIDTPGHV DFTLEVERAL
101: RVLDGAICLF DSVAGVEPQS ETVWRQADKY GVPRICFVNK M

Best Arabidopsis Sequence Match ( AT1G62750.1 )
(BLAST)

001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA

Arabidopsis Description

CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.