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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 9
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH04069 Soybean nucleus, plastid 98.08 97.2
VIT_00s1286g00020.t01 Wine grape cytosol, mitochondrion 25.26 93.36
Os04t0538166-00 Rice cytosol, mitochondrion, peroxisome 16.28 90.07
VIT_00s0323g00080.t01 Wine grape plastid 87.05 87.61
Os04t0538100-01 Rice plasma membrane 43.08 87.05
AT1G62750.1 Thale cress plastid 85.0 84.67
CDY31838 Canola plastid 84.1 84.65
CDY46917 Canola plastid 83.97 84.52
GSMUA_Achr5P13570_001 Banana mitochondrion 78.33 84.39
Bra027021.1-P Field mustard plastid 83.85 84.39
Solyc08g079180.2.1 Tomato plastid 84.23 83.48
PGSC0003DMT400012076 Potato cytosol, plastid 84.1 83.35
Zm00001d025948_P001 Maize plastid 80.64 81.9
EES12566 Sorghum plastid 81.15 81.68
Zm00001d002822_P001 Maize plastid 80.51 81.66
TraesCS2B01G404600.1 Wheat plastid 79.87 81.12
TraesCS2D01G383800.1 Wheat mitochondrion, plastid 79.74 80.99
TraesCS2A01G387000.1 Wheat mitochondrion, plastid 79.74 80.99
HORVU2Hr1G092180.1 Barley plastid 78.85 80.6
KRH75282 Soybean cytosol 10.77 43.08
KRG88956 Soybean mitochondrion 37.82 42.32
KRH75283 Soybean cytosol, mitochondrion 22.95 40.77
KRH75280 Soybean mitochondrion 6.67 39.39
KRH40894 Soybean cytosol 9.62 21.68
KRH13692 Soybean cytosol, mitochondrion 19.36 21.12
KRH13696 Soybean nucleus 22.69 21.0
KRH43759 Soybean nucleus 22.69 21.0
KRH13693 Soybean mitochondrion 21.28 20.07
KRH25682 Soybean plastid 16.41 19.1
KRH55837 Soybean plastid 16.15 18.81
KRH43761 Soybean cytosol, nucleus, plastid 4.74 18.5
KRH53996 Soybean plasma membrane 15.64 17.76
KRH71976 Soybean nucleus 15.26 17.6
KRH33159 Soybean nucleus 15.26 17.5
KRG94823 Soybean cytosol 22.31 17.03
KRH20245 Soybean nucleus 21.15 16.73
KRH63330 Soybean cytosol, plasma membrane 5.77 16.73
KRH03566 Soybean nucleus 20.9 16.5
KRH63943 Soybean plastid 15.77 16.4
KRH40434 Soybean mitochondrion 13.97 16.15
KRH63332 Soybean cytosol 4.49 12.92
KRH00796 Soybean nucleus 8.72 10.35
Protein Annotations
EntrezGene:102663021MapMan:17.7.4.3Gene3D:2.40.30.10Gene3D:3.30.230.10Gene3D:3.30.70.240Gene3D:3.30.70.870
Gene3D:3.40.50.300UniProt:A0A0R0JRC6ncoils:CoilInterPro:EFG_IIIInterPro:EFG_III/VInterPro:EFG_V
InterPro:EFG_V-likeInterPro:EFTu-like_2InterPro:EF_G_plantCEnsemblPlantsGene:GLYMA_05G055500GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003746GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006412
GO:GO:0006414GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009987GO:GO:0016787GO:GO:0019538InterPro:G_TR_CSUniProt:I1K0K6
InterPro:IPR000795InterPro:IPR014721EnsemblPlants:KRH57341ProteinID:KRH57341ProteinID:KRH57341.1HAMAP:MF_00054_B
HAMAP:MF_03063InterPro:P-loop_NTPasePFAM:PF00009PFAM:PF00679PFAM:PF03144PFAM:PF03764
PFAM:PF14492PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR43261InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00838SMART:SM00889SUPFAM:SSF50447SUPFAM:SSF52540SUPFAM:SSF54211
SUPFAM:SSF54980InterPro:Small_GTP-bd_domInterPro:TF_GTP-bd_domTIGRFAMs:TIGR00231TIGRFAMs:TIGR00484InterPro:Transl_B-barrel_sf
InterPro:Transl_elong_EFG/EF2InterPro:Transl_elong_EFG/EF2_IVUniParc:UPI00023C49C1SEG:seg::
Description
fusA2hypothetical protein
Coordinates
chr5:+:5035064..5039016
Molecular Weight (calculated)
86088.0 Da
IEP (calculated)
5.271
GRAVY (calculated)
-0.273
Length
780 amino acids
Sequence
(BLAST)
001: MAAESSLRVA TPTICNLNGS QRRPTTLSPL RFMGFSPRPS HSLTSSSLSH FFGSTRINSN SSSISRQHAP RRNFSVFAMS GDDAKRSVPL KDYRNIGIMA
101: HIDAGKTTTT ERILYYTGRN YKIGEVHEGT ATMDWMEQEQ ERGITITSAA TTTFWNKHRI NIIDTPGHVD FTLEVERALR VLDGAICLFD SVAGVEPQSE
201: TVWRQADKYG VPRICFVNKM DRLGANFYRT RDMIVTNLGA KPLVIQLPIG SEDNFKGVID LVRNKAIVWS GEELGAKFDI VDVPEDLQEQ AQEYRAQMIE
301: TIVEFDDQAM ENYLEGIEPD EETIKKLIRK GTISASFVPV MCGSAFKNKG VQPLLDAVVD YLPSPLDLPA MKGSDPENPE ETIERVASDD EPFAGLAFKI
401: MSDPFVGSLT FVRVYAGKLS AGSYVLNANK GKKERIGRLL EMHANSREDV KVALAGDIIA LAGLKDTITG ETLCDPDNPI VLERMDFPDP VIKVAIEPKT
501: KADVDKMATG LIKLAQEDPS FHFSRDEEIN QTVIEGMGEL HLEIIVDRLK REFKVEANVG APQVNYRESI SKTAEVKYVH KKQSGGQGQF ADITVRFEPM
601: DPGSGYEFKS EIKGGAVPKE YIPGVMKGLE ECMSNGVLAG FPVVDVRAVL TDGSYHDVDS SVLAFQLAAR GAFREGIRKA GPRMLEPIMK VEVVTPEEHL
701: GDVIGDLNSR RGQINSFGDK PGGLKVVDAL VPLAEMFQYV STLRGMTKGR ASYTMQLAMF DVVPQHIQNQ LATKEQEVAA
Best Arabidopsis Sequence Match ( AT1G62750.1 )
(BLAST)
001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA
Arabidopsis Description
CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.