CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88956	Soybean	mitochondrion	90.15	17.07
KRH40894	Soybean	cytosol	18.18	6.94
KRH57341	Soybean	nucleus, plastid	39.39	6.67
KRH04069	Soybean	nucleus, plastid	39.39	6.61
KRH55837	Soybean	plastid	28.03	5.52
KRH25682	Soybean	plastid	28.03	5.52
KRH71976	Soybean	nucleus	27.27	5.33
KRH33159	Soybean	nucleus	27.27	5.29
KRH53996	Soybean	plasma membrane	27.27	5.24
KRH63943	Soybean	plastid	27.27	4.8
KRH75282	Soybean	cytosol	6.82	4.62
KRH40434	Soybean	mitochondrion	21.97	4.3
KRH00796	Soybean	nucleus	19.7	3.96
KRH13696	Soybean	nucleus	18.18	2.85
KRH43759	Soybean	nucleus	18.18	2.85
KRH13692	Soybean	cytosol, mitochondrion	15.15	2.8
KRG94823	Soybean	cytosol	18.18	2.35
KRH13693	Soybean	mitochondrion	13.64	2.18
KRH20245	Soybean	nucleus	14.39	1.93
KRH03566	Soybean	nucleus	13.64	1.82
KRH43761	Soybean	cytosol, nucleus, plastid	0.0	0.0
KRH63330	Soybean	cytosol, plasma membrane	0.0	0.0
KRH63332	Soybean	cytosol	0.0	0.0
KRH75283	Soybean	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0L7P4	EMBL:ACUP02000279	EnsemblPlantsGene:GLYMA_01G075100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006412	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125	InterPro:G_TR_CS	InterPro:IPR000795
EnsemblPlants:KRH75280	ProteinID:KRH75280	ProteinID:KRH75280.1	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom
UniParc:UPI00023BBB8F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:16817206..16817747

Molecular Weight (calculated)

14830.7 Da

IEP (calculated)

9.959

GRAVY (calculated)

-0.552

Length

132 amino acids

Sequence
(BLAST)

001: MARVSRSSPP RLLYSLCCTT ASRSPASSLI GGAFHLRHFS AGNAARTKPD KEPWWKESME RLRNIGISAH IDSGKTTLTE RVLYYTGRIH EIHEVRGRDG
101: VGAKMDSMDL EREKGITIQS AATYCTWKDY KV

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.