CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88956	Soybean	mitochondrion	89.74	25.11
KRH43761	Soybean	cytosol, nucleus, plastid	17.44	17.0
KRH40894	Soybean	cytosol	24.1	13.58
KRH57341	Soybean	nucleus, plastid	43.08	10.77
KRH04069	Soybean	nucleus, plastid	41.54	10.29
KRH75280	Soybean	mitochondrion	4.62	6.82
KRH71976	Soybean	nucleus	21.03	6.07
KRH13696	Soybean	nucleus	26.15	6.05
KRH43759	Soybean	nucleus	26.15	6.05
KRH13693	Soybean	mitochondrion	25.64	6.05
KRH33159	Soybean	nucleus	21.03	6.03
KRH40434	Soybean	mitochondrion	19.49	5.63
KRH13692	Soybean	cytosol, mitochondrion	18.46	5.03
KRH55837	Soybean	plastid	16.92	4.93
KRH53996	Soybean	plasma membrane	16.92	4.8
KRH25682	Soybean	plastid	16.41	4.78
KRG94823	Soybean	cytosol	24.1	4.6
KRH63943	Soybean	plastid	16.41	4.27
KRH20245	Soybean	nucleus	19.49	3.85
KRH03566	Soybean	nucleus	19.49	3.85
KRH00796	Soybean	nucleus	11.28	3.35
KRH75283	Soybean	cytosol, mitochondrion	1.03	0.46
KRH63330	Soybean	cytosol, plasma membrane	0.51	0.37
CDY23967	Canola	cytosol	0.0	0.0
KRH63332	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02000279	EnsemblPlantsGene:GLYMA_01G075300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006412	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0070125	InterPro:IPR000795	UniProt:K7K2H4	EnsemblPlants:KRH75282
ProteinID:KRH75282	ProteinID:KRH75282.1	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	PFscan:PS51722
PANTHER:PTHR43636	PANTHER:PTHR43636:SF2	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
UniParc:UPI000294C93F	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:16835215..16837297

Molecular Weight (calculated)

21856.2 Da

IEP (calculated)

4.474

GRAVY (calculated)

-0.071

Length

195 amino acids

Sequence
(BLAST)

001: MAVAFMEEIS DISIQHQVQD KLIWKADINI IDTPGHVDFT IEVERALRVL DGAILVLCSV GGVQSQSITV DRQMRRYEVP RLAFINKLDR MGADPWKVLN
101: QARSKLRHHS AAIQVPIGLE DDFKGLVDLV QLKAFYFHGS NGENVVAEEV PADMEALVEE KRRELIETVS EVDDKLAEAF LGDETISAAD LEVCR

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.