CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75280	Soybean	mitochondrion	17.07	90.15
KRH75282	Soybean	cytosol	25.11	89.74
KRH75283	Soybean	cytosol, mitochondrion	54.09	85.88
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	86.51	80.83
GSMUA_Achr10P...	Banana	cytosol	79.77	80.23
AT2G45030.1	Thale cress	mitochondrion	85.51	79.05
AT1G45332.1	Thale cress	mitochondrion	85.22	78.78
Bra004884.1-P	Field mustard	plastid	84.5	78.01
CDX74705	Canola	plastid	84.36	77.88
CDY18957	Canola	plastid	84.36	77.78
PGSC0003DMT400066962	Potato	mitochondrion	84.5	77.5
Solyc01g090690.2.1	Tomato	plastid	84.36	77.37
Os03t0565500-01	Rice	mitochondrion	81.92	75.43
Zm00001d034826_P001	Maize	mitochondrion, plastid	81.35	75.3
EER90530	Sorghum	mitochondrion, plastid	81.21	74.67
HORVU7Hr1G082910.2	Barley	mitochondrion	79.77	73.35
TraesCS7B01G248200.1	Wheat	mitochondrion	79.48	73.09
TraesCS7A01G336600.4	Wheat	mitochondrion	79.63	71.15
TraesCS7D01G344300.4	Wheat	mitochondrion	79.63	71.15
KRH57341	Soybean	nucleus, plastid	42.32	37.82
KRH04069	Soybean	nucleus, plastid	41.61	36.85
KRH40894	Soybean	cytosol	9.9	19.94
KRH71976	Soybean	nucleus	18.79	19.38
KRH33159	Soybean	nucleus	18.79	19.26
KRH55837	Soybean	plastid	18.08	18.81
KRH25682	Soybean	plastid	18.08	18.81
KRH43759	Soybean	nucleus	22.53	18.62
KRH13696	Soybean	nucleus	22.53	18.62
KRH53996	Soybean	plasma membrane	18.08	18.34
KRH13692	Soybean	cytosol, mitochondrion	18.51	18.04
KRH40434	Soybean	mitochondrion	17.36	17.93
KRH43761	Soybean	cytosol, nucleus, plastid	5.02	17.5
KRH63330	Soybean	cytosol, plasma membrane	6.74	17.47
KRH13693	Soybean	mitochondrion	20.52	17.29
KRH63943	Soybean	plastid	17.93	16.67
KRH20245	Soybean	nucleus	20.09	14.2
KRG94823	Soybean	cytosol	20.66	14.09
KRH03566	Soybean	nucleus	19.94	14.07
KRH63332	Soybean	cytosol	5.31	13.65
KRH00796	Soybean	nucleus	10.33	10.96

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
UniProt:A0A0R0E4B5	InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_U0161001
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	EnsemblPlants:KRG88956	ProteinID:KRG88956	ProteinID:KRG88956.1
HAMAP:MF_00054_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764
PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf
InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI0006ED92BF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chrscaffold_21:-:2518561..2543092

Molecular Weight (calculated)

77066.2 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.237

Length

697 amino acids

Sequence
(BLAST)

001: MARVSRSSAP RLLYALCSTS SSRSPASSLI GGAFHLRHFS AGNAARAKPE KDPWWKESME RLRNIGISAH IDSGKTTLTE RVLYYTGRIH EIHEVRGRDG
101: VGAKMDSMDL EREKGITIQS AATYCTWKDY KINIIDTPGH VDFTIEVERA LRVLDGAILV LCSVGGVQSQ SITVDRQMRR YEVPRLAFIN KLDRMGADPW
201: KVLNQARSKL RHHSAAIQVP IGLEDDFKGL VDLVQLKAFY FHGSNGENVV TEEVPADMEA LVAEKRRELI ETVSEVDDKL AEAFLGDETI SAADLEEAVR
301: RATIAQKFIP VFMGSAFKNK GVQPLLDGVI SYLPCPIEVS NYALDQTKNE DKVELRGSPD GPLVALAFKL EEGRFGQLTY LRIYEGVIRK GDFIINVNTS
401: KKIKVPRLVR MHSDEMEDIQ EAHAGQIVAV FGVDCASGDT FTDGSVKYTM TSMNVPEPVM SLAVQPVSKD SGGQFSKALN RFQKEDPTFR VGLDPESGQT
501: IISGMGELHL DIYVERIRRE YKVDASVGKP RVNFRETVTQ RADFDYLHKK QSGGQGQYGR VIGYIEPLPA GSSTKFEFEN LLVGQAIPSN FIPAIEKGFK
601: EAANSGALIG HPVENLRVVL IDGAAHAVDS SELAFKLASI YAFRQCYAAS RPVILEPVML VELKVPTEFQ GAVAGDINKR KGVIVGNDQE GDDFFHY

Best Arabidopsis Sequence Match ( AT2G45030.1 )
(BLAST)

001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG2Elongation factor G-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IW10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.