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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 9
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH57341 Soybean nucleus, plastid 97.2 98.08
VIT_00s1286g00020.t01 Wine grape cytosol, mitochondrion 24.9 92.89
Os04t0538166-00 Rice cytosol, mitochondrion, peroxisome 16.14 90.07
VIT_00s0323g00080.t01 Wine grape plastid 86.4 87.74
Os04t0538100-01 Rice plasma membrane 42.57 86.79
AT1G62750.1 Thale cress plastid 84.24 84.67
CDY31838 Canola plastid 83.35 84.65
CDY46917 Canola plastid 83.23 84.52
Bra027021.1-P Field mustard plastid 83.1 84.39
GSMUA_Achr5P13570_001 Banana mitochondrion 77.26 83.98
Solyc08g079180.2.1 Tomato plastid 83.48 83.48
PGSC0003DMT400012076 Potato cytosol, plastid 82.97 82.97
Zm00001d002822_P001 Maize plastid 79.8 81.66
Zm00001d025948_P001 Maize plastid 79.42 81.38
EES12566 Sorghum plastid 80.05 81.29
TraesCS2B01G404600.1 Wheat plastid 78.91 80.86
TraesCS2D01G383800.1 Wheat mitochondrion, plastid 78.78 80.73
TraesCS2A01G387000.1 Wheat mitochondrion, plastid 78.78 80.73
HORVU2Hr1G092180.1 Barley plastid 77.89 80.34
KRG88956 Soybean mitochondrion 36.85 41.61
KRH75282 Soybean cytosol 10.29 41.54
KRH75283 Soybean cytosol, mitochondrion 22.36 40.09
KRH75280 Soybean mitochondrion 6.61 39.39
KRH40894 Soybean cytosol 9.53 21.68
KRH13696 Soybean nucleus 22.49 21.0
KRH43759 Soybean nucleus 22.49 21.0
KRH13692 Soybean cytosol, mitochondrion 19.06 20.98
KRH13693 Soybean mitochondrion 21.09 20.07
KRH25682 Soybean plastid 16.39 19.25
KRH55837 Soybean plastid 16.26 19.1
KRH43761 Soybean cytosol, nucleus, plastid 4.83 19.0
KRH53996 Soybean plasma membrane 15.5 17.76
KRH71976 Soybean nucleus 15.12 17.6
KRH33159 Soybean nucleus 15.12 17.5
KRG94823 Soybean cytosol 22.36 17.22
KRH20245 Soybean nucleus 20.97 16.73
KRH63330 Soybean cytosol, plasma membrane 5.72 16.73
KRH03566 Soybean nucleus 20.71 16.5
KRH63943 Soybean plastid 15.63 16.4
KRH40434 Soybean mitochondrion 13.85 16.15
KRH63332 Soybean cytosol 4.45 12.92
KRH00796 Soybean nucleus 8.64 10.35
Protein Annotations
EntrezGene:100797377MapMan:17.7.4.3Gene3D:2.40.30.10Gene3D:3.30.230.10Gene3D:3.30.70.240Gene3D:3.30.70.870
Gene3D:3.40.50.300UniProt:A0A0R0FND6EMBL:BT096075ProteinID:CAA50573.1ncoils:CoilInterPro:EFG_III
InterPro:EFG_III/VInterPro:EFG_VInterPro:EFG_V-likeInterPro:EFTu-like_2InterPro:EF_G_plantCEnsemblPlantsGene:GLYMA_17G137600
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003746GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006412GO:GO:0006414GO:GO:0008135GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016787GO:GO:0019538
InterPro:G_TR_CSInterPro:IPR000795InterPro:IPR014721EnsemblPlants:KRH04069ProteinID:KRH04069ProteinID:KRH04069.1
HAMAP:MF_00054_BHAMAP:MF_03063InterPro:P-loop_NTPaseUniProt:P34811PFAM:PF00009PFAM:PF00679
PFAM:PF03144PFAM:PF03764PFAM:PF14492PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722
PANTHER:PTHR43261InterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00838SMART:SM00889SUPFAM:SSF50447
SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF54980InterPro:Small_GTP-bd_domInterPro:TF_GTP-bd_domTIGRFAMs:TIGR00231
TIGRFAMs:TIGR00484InterPro:Transl_B-barrel_sfInterPro:Transl_elong_EFG/EF2InterPro:Transl_elong_EFG/EF2_IVUniParc:UPI0000178299SEG:seg
Description
fusA1hypothetical protein
Coordinates
chr17:+:11107375..11111302
Molecular Weight (calculated)
86905.0 Da
IEP (calculated)
5.506
GRAVY (calculated)
-0.277
Length
787 amino acids
Sequence
(BLAST)
001: MAAESSLRVA TPTLCNLNGS QRRPTTTTLS PLRFMGFRPR PSSHSLTSSS LSHFFGSTRI HSNSSSSYSS ISRQHAPRRN FSVFAMSADD AKRSVPLKDY
101: RNIGIMAHID AGKTTTTERI LYYTGRNYKI GEVHEGTATM DWMEQEQERG ITITSAATTT FWNKHRINII DTPGHVDFTL EVERALRVLD GAICLFDSVA
201: GVEPQSETVW RQADKYGVPR ICFVNKMDRL GANFYRTRDM IVTNLGAKPL VIQLPIGSED NFKGVIDLVR NKAIVWSGEE LGAKFDIVDI PEDLQEQAQD
301: YRAQMIENIV EFDDQAMENY LEGIEPDEET IKKLIRKGTI SASFVPVMCG SAFKNKGVQP LLDAVVDYLP SPLDLPAMKG SDPENPEATI ERLASDDEPF
401: AGLAFKIMSD PFVGSLTFVR VYAGKLGAGS YVLNANKGKK ERIGRLLEMH ANSRDDVKVA LAGDIIALAG LKDTITGETL CDPDNPIVLE RMDFPDPVIK
501: VAIEPKTKAD VDKMATGLIK LAQEDPSFHF SRDEEINQTV IEGMGELHLE IIVDRLKREF KVEANVGAPQ VNYRESISKI SEVKYVHKKQ SGGQGQFADI
601: TVRFEPMDPG SGYEFKSEIK GGAVPREYIP GVMKGLEECM SNGVLAGFPV VDVRAVLTDG SYHDVDSSVL AFQLAARGAF REGIRKAGPR MLEPIMKVEV
701: VTPEEHLGDV IGDLNSRRGQ INSFGDKPGG LKVVDSLVPL AEMFQYVSTL RGMTKGRASY TMQLAMFDVV PQHIQNQLAT KEQEVAA
Best Arabidopsis Sequence Match ( AT1G62750.1 )
(BLAST)
001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA
Arabidopsis Description
CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.