Factsheet for GSMUA_Achr10P22340_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	mitochondrion
EpiLoc:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	88.74	82.44
Os03t0565500-01	Rice	mitochondrion	89.61	82.03
Zm00001d034826_P001	Maize	mitochondrion, plastid	88.89	81.81
EER90530	Sorghum	mitochondrion, plastid	88.89	81.27
TraesCS7B01G248200.1	Wheat	mitochondrion	88.6	81.0
HORVU7Hr1G082910.2	Barley	mitochondrion	88.31	80.74
KRG88956	Soybean	mitochondrion	80.23	79.77
AT2G45030.1	Thale cress	mitochondrion	85.71	78.78
AT1G45332.1	Thale cress	mitochondrion	85.71	78.78
Bra004884.1-P	Field mustard	plastid	84.99	78.01
Solyc01g090690.2.1	Tomato	plastid	85.43	77.89
CDX74705	Canola	plastid	84.85	77.88
CDY18957	Canola	plastid	84.85	77.78
PGSC0003DMT400066962	Potato	mitochondrion	85.14	77.63
TraesCS7D01G344300.4	Wheat	mitochondrion	85.71	76.15
TraesCS7A01G336600.4	Wheat	mitochondrion	85.71	76.15
GSMUA_Achr5P13570_001	Banana	mitochondrion	43.29	41.44
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	12.7	20.09
GSMUA_Achr10P...	Banana	cytosol	21.64	19.46
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	15.73	19.33
GSMUA_Achr5P14760_001	Banana	plastid	18.18	18.5
GSMUA_Achr4P01020_001	Banana	cytosol	22.51	17.95
GSMUA_Achr8P27160_001	Banana	mitochondrion	17.03	17.61
GSMUA_Achr10P...	Banana	mitochondrion	16.74	17.19
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	21.21	15.14
GSMUA_Achr2P17400_001	Banana	cytosol	16.02	13.47

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125	EnsemblPlantsGene:GSMUA_Achr10G22340_001
EnsemblPlants:GSMUA_Achr10P22340_001	EnsemblPlants:GSMUA_Achr10T22340_001	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	UniProt:M0RKF9
HAMAP:MF_00054_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764
PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI0002965961	:	:

Description

Elongation factor G, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G22340_001]

Coordinates

chr10:+:27570637..27580286

Molecular Weight (calculated)

76705.9 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.253

Length

693 amino acids

Sequence
(BLAST)

001: MDRVRNIGIS AHIDSGKTTL TERVLFYTGR IHEIHEVRGR DGVGAKMDSM DLEREKGITI QSAATYCTWN GYQINIIDTP GHVDFTIEVE RALRVLDGAI
101: LVLCSVGGVQ SQSITVDRQM RRYEVPRLAF INKLDRMGAD PWKVLNQARS KLRHHSAAVQ VPIGLEEEFQ GLVDLVEMKA YYFHGANGEK VTAADIPQNL
201: EALVTEKRRE LIEVVSEVDD QLAEAFLNDE PISPVDLRMA IRRATVARKF VPVYMGSAFK NKGVQPLLDG VLNYLPCPTE VENYALDQNK SEEKILLPGT
301: PSGPLVALAF KLEEGRFGQL TYLRIYEGVI RKGDFIINVN TGKKIKVPRL VRMHSDEMED IQEAHAGQIV AVFGVDCASG DTFTDGSVRY TMTSMSVPEP
401: VMSLAVSPVS KDSGGQFSKA LNRFQKEDPT FRVGLDVESG QTIISGMGEL HLDIYVERIR REYKVDAKVG KPRVNFRETI TQRAEFDYLH KKQSGGQGQY
501: GRVCGYIEPL PLGSSTKFEF DNHIIGQAIP SNFIPAIEKG FTEASNSGSL IGHPVENVRI VLTDGASHAV DSSELAFKLA AIYAFRKCYS AANPVILEPV
601: MKVELKVPTE FQGTVTGDIN KRKGIIVGND QDGDDTVVVA HVPLNNMFGY STALRSMTQG KGEFTMEYME HSPVSQDVQK QLINAHGANK ASE

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.