Factsheet for GSMUA_Achr5P14760_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0285800-01	Rice	plasma membrane	78.27	79.67
KXG30054	Sorghum	mitochondrion, plastid	78.27	79.43
Zm00001d015929_P002	Maize	plastid	78.12	79.28
VIT_08s0007g08290.t01	Wine grape	plastid	78.56	79.26
TraesCS6D01G183500.1	Wheat	plastid	77.39	78.42
TraesCS6A01G192800.1	Wheat	plastid	77.53	78.34
TraesCS6B01G224800.2	Wheat	plastid	77.24	77.93
KRH71976	Soybean	nucleus	77.09	77.66
Solyc03g058190.2.1	Tomato	plastid	76.21	77.23
KRH33159	Soybean	nucleus	76.95	77.06
Bra008811.1-P	Field mustard	plastid	75.92	76.71
CDY65992	Canola	plastid	75.92	76.71
AT5G13650.2	Thale cress	plastid	76.06	76.63
CDY09816	Canola	plastid	75.92	76.59
CDX91105	Canola	plastid	75.33	76.11
CDX85635	Canola	plastid	75.62	72.74
HORVU6Hr1G050160.1	Barley	plastid	53.74	68.67
GSMUA_Achr8P27160_001	Banana	mitochondrion	38.18	38.81
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	20.26	24.47
GSMUA_Achr10P...	Banana	mitochondrion	23.05	23.26
GSMUA_Achr10P...	Banana	cytosol	18.5	18.18
GSMUA_Achr10P...	Banana	cytosol	18.36	16.21
GSMUA_Achr5P13570_001	Banana	mitochondrion	17.03	16.02
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	10.28	15.98
GSMUA_Achr4P01020_001	Banana	cytosol	18.94	14.84
GSMUA_Achr2P17400_001	Banana	cytosol	13.8	11.41
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	15.86	11.12

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	ncoils:Coil	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0000302	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006364
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009628	GO:GO:0009987	GO:GO:0010468	GO:GO:0016787	GO:GO:0031425
GO:GO:0050821	EnsemblPlantsGene:GSMUA_Achr5G14760_001	EnsemblPlants:GSMUA_Achr5P14760_001	EnsemblPlants:GSMUA_Achr5T14760_001	InterPro:G_TR_CS	InterPro:IPR000795
UniProt:M0SYK5	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SMART:SM00838	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394
InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI0002968B1E	:	:	:

Description

GTP-binding protein TypA/BipA homolog [Source:GMGC_GENE;Acc:GSMUA_Achr5G14760_001]

Coordinates

chr5:-:10680460..10691985

Molecular Weight (calculated)

75394.7 Da

IEP (calculated)

7.961

GRAVY (calculated)

-0.269

Length

681 amino acids

Sequence
(BLAST)

001: MAIGIRTSLG PSPRLPASAN TYRNPREATT SVCFFKEILG RRLSCPFLNS RGCSNPNARL RRTAIRCSTT STAKEAASVS KKTSMTRRDV RNIAIVAHVD
101: HGKTTLVDAM LKQAKVFRDN QTVQERIMDS NDLERERGIT ILSKNTSISY KGTKINIIDT PGHSDFGGEV ERVLNMVEGV LLVVDSVEGP MPQTRFVLKK
201: ALEFGHAVVV VVNKIDRPSA RPDFVINSTF ELFIELNATD EQCDFQVIYA SGIKGKAGLS PDNLADDLGP LFEAILRCIP EPSINKDGPT QMLVSNTEYD
301: EHKGKIAIGR LHAGVLQKGT EVKVCTSDDT CRFAKISELF VYENFSRVPV EQVQAGDICA VCGINDIMIG ETIADKSSGK ALPTIRVEEP TVRMSFSINT
401: SPFVGREGKY VTSRNLRDRL YRELERNLAM KVEDGETSDT FIVSGRGTLH LTILIENMRR EGYEFMVGPP KVINKYIDDK LLEPFEIATV ELPEEYMGPV
501: VELLGKRRGQ MFDMQGVGSE GTSLIKYKIP TRGLLGLRNA ILTVSRGTAV LNTVFDGYRP WAGDISTRDQ GSLVAFEDGS TTSYALFSAQ ERGQLFISPG
601: MEVYKGQIVG SHQRPGDLSL NVCKKKAATN IRSNKEQTVV LDSPLSYSLD DCIEYIQEDE LVEVTPLSIR MCKNPKLTKK R

Best Arabidopsis Sequence Match ( AT5G13650.2 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASV EVKKKQLDRR DNVRNIAIVA HVDHGKTTLV
101: DSMLRQAKVF RDNQVMQERI MDSNDLERER GITILSKNTS ITYKNTKVNI IDTPGHSDFG GEVERVLNMV DGVLLVVDSV EGPMPQTRFV LKKALEFGHA
201: VVVVVNKIDR PSARPEFVVN STFELFIELN ATDEQCDFQA IYASGIKGKA GLSPDDLAED LGPLFEAIIR CVPGPNIEKD GALQMLATNI EYDEHKGRIA
301: IGRLHAGVLR KGMDVRVCTS EDSCRFARVS ELFVYEKFYR VPTDSVEAGD ICAVCGIDNI QIGETIADKV HGKPLPTIKV EEPTVKMSFS VNTSPFSGRE
401: GKYVTSRNLR DRLNRELERN LAMKVEDGET ADTFIVSGRG TLHITILIEN MRREGYEFMV GPPKVINKRV NDKLLEPYEI ATVEVPEAHM GPVVELLGKR
501: RGQMFDMQGV GSEGTTFLRY KIPTRGLLGL RNAILTASRG TAILNTVFDS YGPWAGDIST RDLGSLVAFE DGTSTSYALA SAQERGQMFV GSGVDVYKGQ
601: IVGIHQRPGD LGLNICKKKA ATNIRSNKDV TVILDTPLTY SLDDCIEYIE EDELVEVTPS SIRMCKNQKM AKKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.