CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23967	Canola	cytosol	18.27	98.28
Bra022824.1-P	Field mustard	mitochondrion	92.47	91.44
CDY19061	Canola	mitochondrion	93.43	87.14
CDY54484	Canola	mitochondrion	92.95	86.7
AT2G31060.3	Thale cress	mitochondrion	90.54	84.2
KRH55837	Soybean	plastid	83.81	78.06
KRH25682	Soybean	plastid	83.33	77.61
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	82.69	76.79
PGSC0003DMT400024321	Potato	mitochondrion	81.25	76.13
Solyc07g053470.2.1	Tomato	mitochondrion	80.93	75.83
GSMUA_Achr8P27160_001	Banana	mitochondrion	80.61	75.07
EES01486	Sorghum	mitochondrion	78.53	72.81
Os01t0752700-01	Rice	mitochondrion	78.37	72.66
TraesCS3D01G291300.1	Wheat	mitochondrion	77.4	71.77
TraesCS3B01G326200.1	Wheat	mitochondrion	77.4	71.77
TraesCS3A01G291600.1	Wheat	mitochondrion	77.4	71.77
HORVU3Hr1G072230.1	Barley	plastid	77.08	69.21
Zm00001d043494_P005	Maize	mitochondrion	78.21	65.77
CDY65992	Canola	plastid	39.9	36.94
CDY09816	Canola	plastid	39.74	36.74
CDX91105	Canola	plastid	39.26	36.35
CDX85635	Canola	plastid	39.74	35.03
CDY44781	Canola	plastid	23.72	21.93
CDY40739	Canola	plastid	23.72	21.64
CDX67441	Canola	plastid	23.24	21.14
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	23.08	20.93
CDY49975	Canola	cytosol	12.5	19.55
CDY10337	Canola	cytosol	13.62	17.93
CDX78349	Canola	cytosol	6.25	16.88
CDX90241	Canola	cytosol, extracellular	20.51	16.18
CDY40423	Canola	cytosol	20.19	16.01
CDY31838	Canola	plastid	19.71	15.87
CDY46917	Canola	plastid	19.71	15.87
CDX74705	Canola	plastid	18.91	15.63
CDY18957	Canola	plastid	18.91	15.61
CDY24982	Canola	endoplasmic reticulum, vacuole	20.83	15.51
CDY69302	Canola	cytosol	7.85	15.36
CDY32224	Canola	cytosol	11.54	13.98
CDY10688	Canola	cytosol	18.27	13.07
CDY70516	Canola	cytosol	10.42	12.77
CDY15566	Canola	cytosol	16.35	12.24
CDY05533	Canola	cytosol	12.18	11.64
CDY09982	Canola	nucleus	18.43	11.63
CDY32072	Canola	cytosol	12.02	11.59
CDY71233	Canola	mitochondrion, nucleus	9.29	10.39
CDY70689	Canola	cytosol	8.97	10.35
CDY70526	Canola	nucleus	1.12	8.24
CDY54261	Canola	nucleus	2.72	7.39
CDY49974	Canola	nucleus	0.96	7.06
CDY32225	Canola	nucleus	3.37	5.93

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
GO:A0A078DBW4	InterPro:BipA_V	EnsemblPlants:CDX84803	ProteinID:CDX84803	ProteinID:CDX84803.1	InterPro:EFG_III/V
InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00142102001	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908
PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI0004EF1939	SEG:seg

Description

BnaA03g14270D

Coordinates

chrLK031838:+:1336707..1340823

Molecular Weight (calculated)

68108.4 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.205

Length

624 amino acids

Sequence
(BLAST)

001: MKKKYTTGHT LSPLRAFSAA TGAPPNSSLD PGRLRNVAVI AHVDHGKTTL MDRLLRQCGA DIPHERAMDS INLERERGIT ISSKVTSVFW KENELNMVDT
101: PGHADFGGEV ERVVGMVEGA ILVVDAGEGP LAQTKFVLAK ALKYGLRPIL LLNKVDRPSV SEERCDEVES LVFDLFATLG ATEEQLDFPV LYASAKEGWA
201: SSTFTKEPPA DARNMSQLLD ALVKHVPPPK ADLDEPFLML VSMMEKDYYL GRILTGRVSS GVKIEEGKVV KLMKKKGTTI VSIDAAGAGD IICMAGLTTP
301: SIGHTVASAE VTTALPSVEL DPPTISMTFG VNDSPLAGRD GTQLTGGKIG DRLMAEAETN LAINVIPGLS ESFEVQGRGE LQLGILIENM RREGFELSVS
401: PPKVMYKTED KQRLEPIEEV TIEINEEHVG LVMEALSHRR AEVIDMCPVP GNDGRTRMSL TCPSRGLVGY RCVFSSDTRG TGFMHRAFLK YEKYRGPLGN
501: VRKGVLVSMG YGTITAHSLM GLEARGTLFV SPGLDSYDGM IIGEHSRDTD LDVNPVKAKE LTNIRSVNKD ENVKLSPPRL MTLEEAIGYV ASDELIEVTP
601: KTIRLRKRCL DVTKRKSLSK RAKE

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.