CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0752700-01	Rice	mitochondrion	92.87	92.87
TraesCS3D01G291300.1	Wheat	mitochondrion	89.9	89.9
TraesCS3B01G326200.1	Wheat	mitochondrion	89.75	89.75
TraesCS3A01G291600.1	Wheat	mitochondrion	89.3	89.3
Zm00001d043494_P005	Maize	mitochondrion	96.88	87.87
HORVU3Hr1G072230.1	Barley	plastid	89.15	86.33
GSMUA_Achr8P27160_001	Banana	mitochondrion	80.39	80.75
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	79.2	79.32
CDX84803	Canola	mitochondrion	72.81	78.53
KRH55837	Soybean	plastid	77.86	78.21
KRH25682	Soybean	plastid	77.41	77.76
Bra022824.1-P	Field mustard	mitochondrion	72.81	77.65
CDY19061	Canola	mitochondrion	76.23	76.68
CDY54484	Canola	mitochondrion	76.08	76.53
AT2G31060.3	Thale cress	mitochondrion	76.08	76.3
Bra021694.1-P	Field mustard	mitochondrion	73.7	76.07
PGSC0003DMT400024321	Potato	mitochondrion	75.04	75.83
Solyc07g053470.2.1	Tomato	mitochondrion	75.04	75.83
KXG30054	Sorghum	mitochondrion, plastid	39.23	39.34
OQU84405	Sorghum	plastid	23.33	23.33
EER89181	Sorghum	mitochondrion	21.25	21.5
OQU75622	Sorghum	cytosol	10.7	21.24
OQU84528	Sorghum	cytosol	8.47	21.03
KXG37183	Sorghum	cytosol	20.95	16.73
KXG37185	Sorghum	cytosol	20.95	16.73
EES01455	Sorghum	cytosol	20.95	16.73
EER90530	Sorghum	mitochondrion, plastid	18.72	16.62
EES03541	Sorghum	mitochondrion	20.8	16.61
EES12566	Sorghum	plastid	18.72	16.26
KXG37923	Sorghum	cytosol	19.76	12.73
EER90029	Sorghum	cytosol	18.57	12.56
KXG30393	Sorghum	nucleus	11.0	8.39

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:8075587	UniProt:C5XK57	EnsemblPlants:EES01486	ProteinID:EES01486	ProteinID:EES01486.1	InterPro:EFG_III/V
InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8	EnsemblPlantsGene:SORBI_3003G297800
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	unigene:Sbi.7233	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI0001A84A1A	RefSeq:XP_002456366.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62950690..62961848

Molecular Weight (calculated)

72704.1 Da

IEP (calculated)

7.284

GRAVY (calculated)

-0.107

Length

673 amino acids

Sequence
(BLAST)

001: MAAALLLRGL RSSASRAHIH SLSHASSPSA LGSSLLRRLY SSAAASTAAS PAFTPAGVMD PSRIRNVAVI AHVDHGKTTL MDRLLRQCGA DIPHERAMDS
101: ISLERERGIT IASKVTSVSW KENELNMVDT PGHADFGGEV ERVVGMVEGA VLVVDAGEGP LAQTKFVLSK ALKYGLRPIL LLNKVDRPSV SEETCNEVES
201: LVFDLFANLG ATEEQLDFPV LYASAKEGWA SLTFTKSPPD NAKNMSSLLD SIVQHVPSPK ADLEAPFQML VSMMERDFYL GRILTGRVRS GVVRVGDKVH
301: GLRSTDDGVQ KIEDGKVVKL MKKKGTSMVT VETAGAGDII SMAGLAAPAI GHTVANSEVL TALPTIELDP PTISMTFGVN DSPLAGRDGT HLTGAKIGNR
401: LMAEAETNLA INVLPGPLSE SYEVQGRGEL QLGILIENMR REGFELSVSP PKVMYKTECG QRLEPIEEVT VEVDEEHVGF VLETITHRKG EVVDMGPVPG
501: TTGRTRIFMT CPSRGLVGVK GIFSSFTRGT GFMHRAFQAY AKYRGPLGSV RKGVLISVGK GLITSHALMS LEARGILFVS PGMEAYEGMI VGEHSRDSDL
601: EVNPVRTKEL TNIRAPGKDE NVRLSPPRLM SLEEAIGYVA ADELIEVTPK VIRLRKKYLD STKRKMMKNK PMD

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.