Factsheet for AT2G31060.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022824.1-P	Field mustard	mitochondrion	86.44	91.92
CDY54484	Canola	mitochondrion	91.51	91.78
CDY19061	Canola	mitochondrion	91.51	91.78
Bra021694.1-P	Field mustard	mitochondrion	88.23	90.8
CDX84803	Canola	mitochondrion	84.2	90.54
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	83.46	83.33
KRH25682	Soybean	plastid	82.56	82.69
KRH55837	Soybean	plastid	82.56	82.69
PGSC0003DMT400024321	Potato	mitochondrion	81.37	81.98
Solyc07g053470.2.1	Tomato	mitochondrion	81.37	81.98
GSMUA_Achr8P27160_001	Banana	mitochondrion	77.35	77.46
EES01486	Sorghum	mitochondrion	76.3	76.08
Os01t0752700-01	Rice	mitochondrion	75.71	75.48
TraesCS3B01G326200.1	Wheat	mitochondrion	75.11	74.89
TraesCS3D01G291300.1	Wheat	mitochondrion	75.11	74.89
TraesCS3A01G291600.1	Wheat	mitochondrion	74.81	74.59
HORVU3Hr1G072230.1	Barley	plastid	74.66	72.09
Zm00001d043494_P005	Maize	mitochondrion	75.86	68.6
AT5G13650.2	Thale cress	plastid	39.2	38.91
AT5G39900.1	Thale cress	mitochondrion	22.35	22.62
AT5G08650.1	Thale cress	plastid	22.65	22.32
AT1G62750.1	Thale cress	plastid	19.67	16.86
AT3G12915.2	Thale cress	cytosol	19.37	16.5
AT2G45030.1	Thale cress	mitochondrion	18.33	16.31
AT1G45332.1	Thale cress	mitochondrion	18.18	16.18
AT1G56070.2	Thale cress	cytosol	19.82	15.78
AT3G22980.2	Thale cress	cytosol	18.78	12.41
AT1G06220.2	Thale cress	cytosol	17.88	12.16
AT5G25230.1	Thale cress	cytosol	17.59	12.13

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:817658	ProteinID:AEC08486.1	ArrayExpress:AT2G31060	EnsemblPlantsGene:AT2G31060	RefSeq:AT2G31060	TAIR:AT2G31060
RefSeq:AT2G31060-TAIR-G	EnsemblPlants:AT2G31060.3	TAIR:AT2G31060.3	Unigene:At.38268	InterPro:BipA_V	InterPro:EFG_III/V
InterPro:EFG_V-like	UniProt:F4IPW5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:G_TR_CS	InterPro:IPR000795	RefSeq:NP_001189647.1	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0001E92D6C	SEG:seg	:	:	:

Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]

Coordinates

chr2:-:13213100..13218724

Molecular Weight (calculated)

72939.8 Da

IEP (calculated)

6.711

GRAVY (calculated)

-0.208

Length

671 amino acids

Sequence
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV SPFVTSIFWK DNELNMVDTP GHADFGGEVE RVVGMVEGAI LVVDAGEGPL AQTKFVLAKA LKYGLRPILL LNKVDRPSVT EERCDEVESL
201: VFDLFANCGA TEEQLDFPVL YASAKEGWAS STYTKDPPVD AKNMADLLDA VVRHVQPPKA NLDEPFLMLV SMMEKDFYLG RILTGRVTSG VVRVGDRVNG
301: LRKTDSGSEK IEEAKVVKLM KKKGTTIVSI DAAGAGDIIC MAGLTAPSIG HTVASAEVTT ALPTVELDPP TISMTFGVND SPLAGQDGTH LTGGRIGDRL
401: MAEAETNLAI NVIPGLSESY EVQGRGELQL GILIENMRRE GFELSVSPPK VMYKTEKGQK LEPIEEVTIE INDEHVGLVM EALSHRRAEV IDMGPVPGNE
501: GRTRLSLTCP SRGLVGYRCV FSSDTRGTGF MHRAFLTYEK YRGPLGNVRK GVLVSMARGT ITAHSLMSLE ARGILFVSPG LDSYDGMIIG EHSRETDLDL
601: NPVKAKELTN IRSAGKDENV KLSPPRLMTL EEAIGYVASD ELIEVTPKTI RLRKRCLDVN KRKSQSKRAK D

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.