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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028444.1-P Field mustard mitochondrion 94.42 94.7
CDX67441 Canola plastid 94.87 91.69
CDY65319 Canola endoplasmic reticulum, plastid, vacuole 94.27 90.84
KRH40434 Soybean mitochondrion 78.73 77.33
Solyc03g058880.2.1 Tomato mitochondrion 76.77 77.12
PGSC0003DMT400034344 Potato mitochondrion 76.62 77.09
VIT_14s0108g00130.t01 Wine grape mitochondrion, plastid 77.98 75.92
GSMUA_Achr10P... Banana mitochondrion 75.41 74.07
Os06t0144800-01 Rice mitochondrion 74.06 74.06
EER89181 Sorghum mitochondrion 74.21 73.98
TraesCS4A01G386100.3 Wheat mitochondrion 73.76 73.42
TraesCS7D01G081700.2 Wheat mitochondrion 73.6 73.27
HORVU7Hr1G019550.9 Barley mitochondrion 73.76 73.2
TraesCS7A01G087200.1 Wheat mitochondrion 73.45 73.12
Zm00001d000213_P001 Maize mitochondrion 74.06 72.21
KRH00796 Soybean nucleus 49.62 50.08
AT5G08650.1 Thale cress plastid 47.36 46.11
AT5G13650.2 Thale cress plastid 23.23 22.78
AT2G31060.3 Thale cress mitochondrion 22.62 22.35
AT2G45030.1 Thale cress mitochondrion 18.85 16.58
AT1G45332.1 Thale cress mitochondrion 18.85 16.58
AT3G12915.2 Thale cress cytosol 18.4 15.48
AT1G56070.2 Thale cress cytosol 19.46 15.3
AT1G62750.1 Thale cress plastid 17.5 14.81
AT3G22980.2 Thale cress cytosol 20.06 13.1
AT5G25230.1 Thale cress cytosol 18.1 12.33
AT1G06220.2 Thale cress cytosol 18.25 12.26
Protein Annotations
Gene3D:2.40.30.10Gene3D:3.30.70.2570Gene3D:3.30.70.3380Gene3D:3.30.70.870Gene3D:3.40.50.300MapMan:35.1
EntrezGene:833987ProteinID:AED94489.1ArrayExpress:AT5G39900EnsemblPlantsGene:AT5G39900RefSeq:AT5G39900TAIR:AT5G39900
RefSeq:AT5G39900-TAIR-GEnsemblPlants:AT5G39900.1TAIR:AT5G39900.1Unigene:At.43683ProteinID:BAB10215.1EMBL:BT020385
EMBL:BT020455InterPro:EF-4InterPro:EFG_III/VInterPro:EFG_V-likeGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003924GO:GO:0004650GO:GO:0005488GO:GO:0005524GO:GO:0005525
GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0005739GO:GO:0005743GO:GO:0005759GO:GO:0005975GO:GO:0006139GO:GO:0006397
GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0019538GO:GO:0031124GO:GO:0043022
GO:GO:0045727GO:GO:0071555InterPro:G_TR_CSInterPro:IPR000795InterPro:IPR038363InterPro:LepA_CTD
InterPro:LepA_C_sfInterPro:LepA_IVHAMAP:MF_00071RefSeq:NP_198806.2InterPro:P-loop_NTPasePFAM:PF00009
PFAM:PF00679PFAM:PF06421PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR43512PANTHER:PTHR43512:SF3
UniProt:Q9FLE4SUPFAM:SSF50447SUPFAM:SSF52540SUPFAM:SSF54980InterPro:Small_GTP-bd_domInterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231TIGRFAMs:TIGR01393InterPro:Transl_B-barrel_sfUniParc:UPI00000A4796SEG:seg:
Description
Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
Coordinates
chr5:-:15976507..15979001
Molecular Weight (calculated)
73599.7 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.177
Length
663 amino acids
Sequence
(BLAST)
001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.