CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000213_P001	Maize	mitochondrion	96.69	94.56
Os06t0144800-01	Rice	mitochondrion	92.33	92.61
TraesCS4A01G386100.3	Wheat	mitochondrion	89.32	89.19
HORVU7Hr1G019550.9	Barley	mitochondrion	89.32	88.92
TraesCS7D01G081700.2	Wheat	mitochondrion	88.87	88.74
TraesCS7A01G087200.1	Wheat	mitochondrion	88.57	88.44
GSMUA_Achr10P...	Banana	mitochondrion	80.45	79.26
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	80.45	78.56
PGSC0003DMT400034344	Potato	mitochondrion	77.14	77.85
Solyc03g058880.2.1	Tomato	mitochondrion	77.14	77.73
KRH40434	Soybean	mitochondrion	76.99	75.85
Bra028444.1-P	Field mustard	mitochondrion	74.74	75.19
AT5G39900.1	Thale cress	mitochondrion	73.98	74.21
CDX67441	Canola	plastid	74.74	72.45
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	74.29	71.8
KRH00796	Soybean	nucleus	49.77	50.38
OQU84405	Sorghum	plastid	47.37	46.81
KXG30054	Sorghum	mitochondrion, plastid	23.16	22.95
EES01486	Sorghum	mitochondrion	21.5	21.25
OQU75622	Sorghum	cytosol	10.38	20.35
OQU84528	Sorghum	cytosol	8.12	19.93
EER90530	Sorghum	mitochondrion, plastid	18.8	16.49
EES12566	Sorghum	plastid	18.2	15.61
EES01455	Sorghum	cytosol	19.1	15.07
KXG37185	Sorghum	cytosol	18.95	14.95
KXG37183	Sorghum	cytosol	18.95	14.95
EES03541	Sorghum	mitochondrion	18.2	14.35
KXG37923	Sorghum	cytosol	20.0	12.73
EER90029	Sorghum	cytosol	16.84	11.26
KXG30393	Sorghum	nucleus	10.38	7.82

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:8068764	EnsemblPlants:EER89181	ProteinID:EER89181	ProteinID:EER89181.1	InterPro:EF-4	InterPro:EFG_III/V
InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363
InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512
PANTHER:PTHR43512:SF3	EnsemblPlantsGene:SORBI_3010G034100	SUPFAM:SSF52540	SUPFAM:SSF54980	unigene:Sbi.5644	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	UniParc:UPI0001A89B02	RefSeq:XP_002437814.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:2773939..2779877

Molecular Weight (calculated)

73226.3 Da

IEP (calculated)

8.343

GRAVY (calculated)

-0.205

Length

665 amino acids

Sequence
(BLAST)

001: MAGAAVLRRS ARRIYRHLAA APAFSRSVLQ QPKRLLSSQS SPEHGARGAV SGSELALYPP ERVRNFSIIA HVDHGKSTLA DRLLELTGTI QKGHGQPQYL
101: DKLQVERERG ITVKAQTATM FYRHVSASQD SDTPKYLLNL IDTPGHVDFS YEVSRSLAAC QGALLVVDAA QGVQAQTIAN FYLAFESNLS IIPVINKIDQ
201: PTADPDNVKD QLKRLFDIDP SEALLTSAKT GQGLEQVLPA VIERIPSPPG KCDAPVRMLL LDSYYDEYKG VICHVAIVDG ALRKGDKIAS AATGRAYEVL
301: DVGIMHPELK PTGVLYTGQV GYVISGMRST KEARIGDTLH QAKSTVEPLP GFKPAKHMVF SGLYPADGSD FEALSHAIEK LTCNDASVSI TKETSNALGM
401: GFRCGFLGLL HMDVFHQRLE QEYGAQVIST IPTVPYIFEY GDGSKVQVEN PAALASNPGK RVAACWEPTV IATIIIPSEY VGPVIMLCSE RRGEQLEYTF
501: IDAQRALLKY QLPLKEIIVD FYNELKGITS GYATFDYEDS EYQQSDLVKM DILLNGQPVD AMATIVHNQK AQRVGKELVE KLKKFIERQM FEITIQAAIG
601: SKVIARETLS AMRKNVLAKC YGGDITRKKK LLEKQKEGKK RMKRVGSVDI PQEAFHELLK VSNSK

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.