Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49975 | Canola | cytosol | 47.49 | 99.75 |
| CDX90241 | Canola | cytosol, extracellular | 93.32 | 98.86 |
| CDY49974 | Canola | nucleus | 10.02 | 98.82 |
| CDY32072 | Canola | cytosol | 76.25 | 98.76 |
| CDY05533 | Canola | cytosol | 76.85 | 98.62 |
| CDY70526 | Canola | nucleus | 9.9 | 97.65 |
| CDY70516 | Canola | cytosol | 56.21 | 92.53 |
| AT1G56070.2 | Thale cress | cytosol | 92.96 | 92.41 |
| OQU75622 | Sorghum | cytosol | 37.23 | 92.04 |
| KRH13696 | Soybean | nucleus | 90.81 | 90.27 |
| CDY40423 | Canola | cytosol | 84.61 | 90.09 |
| KRH43759 | Soybean | nucleus | 90.45 | 89.92 |
| Solyc08g062920.2.1 | Tomato | nucleus, plastid | 88.42 | 89.49 |
| Solyc08g062910.2.1 | Tomato | cytosol, extracellular, nucleus, unclear | 81.86 | 89.09 |
| GSMUA_Achr10P... | Banana | cytosol | 81.15 | 88.2 |
| KXG37185 | Sorghum | cytosol | 88.54 | 88.02 |
| KXG37183 | Sorghum | cytosol | 88.54 | 88.02 |
| VIT_19s0027g00760.t01 | Wine grape | cytosol | 89.5 | 87.92 |
| Zm00001d034773_P001 | Maize | cytosol | 88.42 | 87.9 |
| Zm00001d012770_P001 | Maize | plastid | 88.42 | 87.9 |
| Zm00001d034776_P001 | Maize | cytosol | 88.42 | 87.9 |
| TraesCS4A01G363800.1 | Wheat | cytosol, nucleus, plastid | 88.31 | 87.78 |
| EES01455 | Sorghum | cytosol | 88.31 | 87.78 |
| Zm00001d034771_P002 | Maize | cytosol | 88.19 | 87.66 |
| TraesCS5D01G509600.1 | Wheat | cytosol | 88.07 | 87.54 |
| HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 88.07 | 87.54 |
| TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 88.07 | 87.54 |
| TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 88.07 | 87.54 |
| TraesCS5D01G509700.1 | Wheat | cytosol | 86.16 | 87.52 |
| AT3G12915.2 | Thale cress | cytosol | 82.22 | 87.44 |
| TraesCS3A01G232300.1 | Wheat | cytosol, golgi | 87.83 | 87.31 |
| TraesCS7D01G449300.1 | Wheat | cytosol | 87.83 | 87.31 |
| HORVU7Hr1G106150.1 | Barley | cytosol | 87.71 | 87.19 |
| TraesCS3D01G220900.1 | Wheat | golgi | 87.71 | 87.19 |
| TraesCS7B01G362600.1 | Wheat | cytosol | 87.71 | 87.19 |
| TraesCS7A01G461100.1 | Wheat | cytosol, nucleus, unclear | 87.71 | 87.19 |
| TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 87.59 | 87.07 |
| TraesCS3B01G261500.1 | Wheat | cytosol | 87.59 | 87.07 |
| TraesCS4A01G363700.1 | Wheat | cytosol, golgi, unclear | 87.59 | 87.07 |
| HORVU3Hr1G057890.1 | Barley | cytosol | 87.35 | 86.83 |
| HORVU3Hr1G057880.1 | Barley | cytosol | 87.35 | 86.83 |
| Bra020542.1-P | Field mustard | cytosol | 97.73 | 86.67 |
| TraesCS2A01G234500.1 | Wheat | cytosol | 12.89 | 86.4 |
| TraesCS7A01G288600.1 | Wheat | cytosol | 12.53 | 86.07 |
| GSMUA_Achr4P01020_001 | Banana | cytosol | 88.78 | 85.62 |
| TraesCS6A01G189500.1 | Wheat | cytosol, nucleus, plastid | 12.77 | 85.6 |
| Os01t0742200-01 | Rice | cytosol, nucleus | 82.7 | 83.9 |
| TraesCS5D01G509800.1 | Wheat | cytosol | 44.15 | 82.77 |
| TraesCS4A01G363900.1 | Wheat | plastid | 64.56 | 82.34 |
| HORVU5Hr1G116710.1 | Barley | cytosol | 55.49 | 79.22 |
| KRH43761 | Soybean | cytosol, nucleus, plastid | 18.74 | 78.5 |
| GSMUA_Achr6P22520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 39.5 | 75.57 |
| KRH13693 | Soybean | mitochondrion | 71.48 | 72.43 |
| CDY54261 | Canola | nucleus | 19.57 | 71.3 |
| Zm00001d020342_P001 | Maize | mitochondrion | 33.41 | 70.18 |
| KRH13692 | Soybean | cytosol, mitochondrion | 57.28 | 67.13 |
| TraesCS1D01G023700.1 | Wheat | cytosol | 58.0 | 57.79 |
| TraesCS1A01G027600.1 | Wheat | cytosol | 56.09 | 55.62 |
| TraesCS1D01G026800.1 | Wheat | cytosol | 45.11 | 54.31 |
| TraesCSU01G002600.1 | Wheat | cytosol | 55.73 | 54.11 |
| TraesCS1B01G033500.1 | Wheat | cytosol | 25.89 | 53.85 |
| HORVU1Hr1G003960.9 | Barley | cytosol | 54.18 | 49.24 |
| Os05t0467501-00 | Rice | cytosol | 24.94 | 45.83 |
| CDY10337 | Canola | cytosol | 22.08 | 39.03 |
| CDY70689 | Canola | cytosol | 23.99 | 37.15 |
| CDY71233 | Canola | mitochondrion, nucleus | 24.22 | 36.38 |
| CDY15566 | Canola | cytosol | 36.04 | 36.25 |
| CDY32224 | Canola | cytosol | 19.81 | 32.23 |
| CDY09982 | Canola | nucleus | 37.71 | 31.95 |
| CDY10688 | Canola | cytosol | 32.22 | 30.96 |
| CDY69302 | Canola | cytosol | 8.83 | 23.2 |
| CDY31838 | Canola | plastid | 21.0 | 22.71 |
| CDY46917 | Canola | plastid | 21.0 | 22.71 |
| CDY32225 | Canola | nucleus | 9.43 | 22.32 |
| CDX74705 | Canola | plastid | 18.97 | 21.06 |
| CDY18957 | Canola | plastid | 18.97 | 21.03 |
| CDX84803 | Canola | mitochondrion | 15.51 | 20.83 |
| CDY54484 | Canola | mitochondrion | 15.63 | 19.58 |
| CDY19061 | Canola | mitochondrion | 15.63 | 19.58 |
| CDX67441 | Canola | plastid | 14.68 | 17.93 |
| CDY44781 | Canola | plastid | 14.44 | 17.93 |
| CDY65319 | Canola | endoplasmic reticulum, plastid, vacuole | 14.68 | 17.88 |
| CDY65992 | Canola | plastid | 14.32 | 17.8 |
| CDX91105 | Canola | plastid | 14.32 | 17.8 |
| CDY09816 | Canola | plastid | 14.32 | 17.78 |
| CDY40739 | Canola | plastid | 14.44 | 17.69 |
| CDX85635 | Canola | plastid | 14.32 | 16.95 |
| CDX78349 | Canola | cytosol | 4.53 | 16.45 |
| CDY23967 | Canola | cytosol | 1.55 | 11.21 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 | MapMan:35.1 |
| GO:A0A078GIF8 | UniProt:A0A078GIF8 | EnsemblPlants:CDY24982 | ProteinID:CDY24982 | ProteinID:CDY24982.1 | InterPro:EFG_III/V |
| InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00028785001 | InterPro:G_TR_CS | InterPro:IPR000795 |
| InterPro:IPR014721 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PFAM:PF03764 |
| PFAM:PF14492 | PRINTS:PR00315 | ScanProsite:PS00301 | PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF11 |
| InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 | SMART:SM00889 | SUPFAM:SSF50447 | SUPFAM:SSF52540 |
| SUPFAM:SSF54211 | SUPFAM:SSF54980 | SignalP:SignalP-noTM | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | TIGRFAMs:TIGR00231 |
| TMHMM:TMhelix | InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EFG/EF2_IV | UniParc:UPI0004EEA4DE | SEG:seg | : |
Description
BnaC02g40260DBnaC02g40260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIF8]
Coordinates
chrLK032167:-:22438..25846
Molecular Weight (calculated)
93669.4 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.181
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSTVSLWS LLLFYFYFLG NRSGIYKSEF VKMVKFTADE LRRIMDYKHN IRNMSVIAHV DHGKSTLTDS LVAAAGIIAQ EVAGDVRMTD TRADEAERGI
101: TIKSTGISLY YEMTDASLKS FTGARDGNEY LINLIDSPGH VDFSSEVTAA LRITDGALVV VDCIEGVCVQ TETVLRQALG ERIRPVLTVN KMDRCFLELQ
201: VDGEEAYQTF QRVIENANVI MATYEDPLLG DVQVYPEKGT VAFSAGLHGW AFTLTNFAKM YASKFGVDET KMMERLWGEN FFDPATRKWS GKNTGSATCK
301: RGFVQFCYEP IKQIIATCMN DQKDKLWPML QKLGVQMKSD EKELMGKPLM KRVMQTWLPA STALLEMMIF HLPSPHTAQR YRVENLFFAF GRVFSGKVST
401: GMKVRIMGPN FVPGEKKDLY VKSVQRTVIW MGKRQETVED VPCGNTVAMV GLDQFITKNA TLTNEKEVDA HPIRAMKFSV SPVVRVAVQC KVASDLPKLV
501: EGLKRLAKSD PMVVCTMEES GEHIVAGAGE LHLEICLKDL QDDFMGGAEI VKSDPVVSFR ETVLERSVRT VMSKSPNKHN RLYMEARPLE DGLAEAIDDG
601: RIGPRDDPKI RSKILAEEFG WDKDLAKKIW AFGPETTGPN MVVDMCKGVQ YLNEIKDSVV AGFQWASKEG PLCDENMRGI CFEVCDVVLH SDAIHRGGGQ
701: VIPTARRVIY ASQITAKPRL LEPVYMVEIQ APEGALGGIY SVLNQKRGHV FEEMQRPGTP LYNIKAYLPV VESFGFSSQL RAATSGQAFP QCVFDHWEMM
801: SSDPLEAGSQ ASTLVTDIRK RKGMKEQMTP LSDFEDKL
101: TIKSTGISLY YEMTDASLKS FTGARDGNEY LINLIDSPGH VDFSSEVTAA LRITDGALVV VDCIEGVCVQ TETVLRQALG ERIRPVLTVN KMDRCFLELQ
201: VDGEEAYQTF QRVIENANVI MATYEDPLLG DVQVYPEKGT VAFSAGLHGW AFTLTNFAKM YASKFGVDET KMMERLWGEN FFDPATRKWS GKNTGSATCK
301: RGFVQFCYEP IKQIIATCMN DQKDKLWPML QKLGVQMKSD EKELMGKPLM KRVMQTWLPA STALLEMMIF HLPSPHTAQR YRVENLFFAF GRVFSGKVST
401: GMKVRIMGPN FVPGEKKDLY VKSVQRTVIW MGKRQETVED VPCGNTVAMV GLDQFITKNA TLTNEKEVDA HPIRAMKFSV SPVVRVAVQC KVASDLPKLV
501: EGLKRLAKSD PMVVCTMEES GEHIVAGAGE LHLEICLKDL QDDFMGGAEI VKSDPVVSFR ETVLERSVRT VMSKSPNKHN RLYMEARPLE DGLAEAIDDG
601: RIGPRDDPKI RSKILAEEFG WDKDLAKKIW AFGPETTGPN MVVDMCKGVQ YLNEIKDSVV AGFQWASKEG PLCDENMRGI CFEVCDVVLH SDAIHRGGGQ
701: VIPTARRVIY ASQITAKPRL LEPVYMVEIQ APEGALGGIY SVLNQKRGHV FEEMQRPGTP LYNIKAYLPV VESFGFSSQL RAATSGQAFP QCVFDHWEMM
801: SSDPLEAGSQ ASTLVTDIRK RKGMKEQMTP LSDFEDKL
001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
Arabidopsis Description
LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.