Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18292 | Soybean | nucleus | 95.9 | 95.9 |
| KRH01476 | Soybean | cytosol | 81.64 | 81.75 |
| VIT_11s0016g03260.t01 | Wine grape | cytosol | 71.99 | 71.62 |
| KRH41728 | Soybean | extracellular, vacuole | 4.36 | 70.21 |
| PGSC0003DMT400006585 | Potato | cytosol | 67.64 | 66.84 |
| PGSC0003DMT400083452 | Potato | cytosol | 9.25 | 63.06 |
| GSMUA_Achr1P19740_001 | Banana | cytosol | 60.5 | 60.9 |
| Os06t0622500-00 | Rice | cytosol | 30.38 | 60.53 |
| KXG33895 | Sorghum | cytosol | 55.22 | 55.44 |
| TraesCS7A01G398600.1 | Wheat | cytosol | 55.22 | 55.15 |
| TraesCS7B01G299300.1 | Wheat | cytosol, mitochondrion | 52.58 | 55.12 |
| Zm00001d042523_P001 | Maize | cytosol | 54.56 | 54.99 |
| TraesCS7D01G392900.2 | Wheat | cytosol | 54.95 | 54.88 |
| HORVU7Hr1G093620.9 | Barley | cytosol | 52.44 | 52.72 |
| KRH27971 | Soybean | nucleus | 13.61 | 17.85 |
| KRH77487 | Soybean | nucleus | 13.47 | 17.65 |
| KRH24006 | Soybean | cytosol | 12.55 | 16.13 |
| KRH29310 | Soybean | cytosol | 3.57 | 8.44 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100813971 | MapMan:13.3.4.1.1.2.1 | EMBL:ACUP02011628 | EnsemblPlantsGene:GLYMA_19G042200 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1N6L5 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EnsemblPlants:KRG93804 | ProteinID:KRG93804 | ProteinID:KRG93804.1 | PFAM:PF00515 | PFAM:PF12895 | PFAM:PF13181 |
| PFAM:PF13432 | PFAM:PF14559 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF13 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI000233E344 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:6140109..6151313
Molecular Weight (calculated)
84284.9 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.336
Length
757 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAILVDCVQ KSLRHFMHSN AIFISQRLCA QFPSETNLQL LAGCYLQSNQ AYCAYHILKG AQTAQSRYLF ALSCFHMDLL SEAEDALCHA DEPGAEVPNG
101: ATGHYLLGLI YRCTDRRKNA IQHFKQALSM DPLMWAAYEE LCILGAAEEA TVVFGEAAAF CIQKQYLNCS TSPNSHMSSE HTNEVAARPC MSEEASPRQL
201: KQMQGLKDTA VYHHGASILG GAAGQPINSG SSNMSFYNTP SPMVAQLSSV APPPLCRNVL PNDQNLTTLG ADSSPKSTVN SPIQAPRRKF VGEGKLRKIS
301: GRLFSDSGPR RTSRLSSDSS VNTNANSTVV SGNGTNNSYK GGSKLNHMAF RTMAIRKGQS WANENIDEGI RNDVPDDSSL NSTSINSCSS PVIEAKSYEQ
401: EAATFQIGGQ VTSGFKVITG ASEILTLLRV LGEGYRLSCL YRCQDALDTY LKLPQKHYNT GWVLSQVGKA YFELVDYLEA DRAFSHARQI TPYSLEGMDI
501: HSTVLYHLKE DMKLSYLAQE LISTDRLAPQ SWCAMGNCYS LQKDHETALK NFQRAVQLNP RFAYAHTLCG HEYVALEDFE NGIKCYHSAL RVDSRHYNAW
601: YGLGMLYLRQ EKYEFSEHHF HMAYQINPRS SVILSYLGTA LHALKRSGEA LAIMEKAILE DKKNPLPMYQ KASILVSLER FDEALDVLEE LKEAQPRESS
701: VYALMGNIYR RRHMHERAMF HYGVALDLKP SVTDAATIKA AVEKLIIPDE FQDEDDS
101: ATGHYLLGLI YRCTDRRKNA IQHFKQALSM DPLMWAAYEE LCILGAAEEA TVVFGEAAAF CIQKQYLNCS TSPNSHMSSE HTNEVAARPC MSEEASPRQL
201: KQMQGLKDTA VYHHGASILG GAAGQPINSG SSNMSFYNTP SPMVAQLSSV APPPLCRNVL PNDQNLTTLG ADSSPKSTVN SPIQAPRRKF VGEGKLRKIS
301: GRLFSDSGPR RTSRLSSDSS VNTNANSTVV SGNGTNNSYK GGSKLNHMAF RTMAIRKGQS WANENIDEGI RNDVPDDSSL NSTSINSCSS PVIEAKSYEQ
401: EAATFQIGGQ VTSGFKVITG ASEILTLLRV LGEGYRLSCL YRCQDALDTY LKLPQKHYNT GWVLSQVGKA YFELVDYLEA DRAFSHARQI TPYSLEGMDI
501: HSTVLYHLKE DMKLSYLAQE LISTDRLAPQ SWCAMGNCYS LQKDHETALK NFQRAVQLNP RFAYAHTLCG HEYVALEDFE NGIKCYHSAL RVDSRHYNAW
601: YGLGMLYLRQ EKYEFSEHHF HMAYQINPRS SVILSYLGTA LHALKRSGEA LAIMEKAILE DKKNPLPMYQ KASILVSLER FDEALDVLEE LKEAQPRESS
701: VYALMGNIYR RRHMHERAMF HYGVALDLKP SVTDAATIKA AVEKLIIPDE FQDEDDS
001: MEAMLVDCVN NSLRHFVYKN AIFMCERLCA EFPSEVNLQL LATSYLQNNQ AYSAYHLLKG TQMAQSRYLF ALSCFQMDLL NEAESALCPV NEPGAEIPNG
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
101: AAGHYLLGLI YKYTDRRKNA AQQFKQSLTI DPLLWAAYEE LCILGAAEEA TAVFGETAAL SIQKQYMQQL STSLGLNTYN EERNSTSTKN TSSEDYSPRQ
201: SKHTQSHGLK DISGNFHSHG VNGGVSNMSF YNTPSPVAAQ LSGIAPPPLF RNFQPAVANP NSLITDSSPK STVNSTLQAP RRKFVDEGKL RKISGRLFSD
301: SGPRRSSRLS ADSGANINSS VATVSGNVNN ASKYLGGSKL SSLALRSVTL RKGHSWANEN MDEGVRGEPF DDSRPNTAST TGSMASNDQE DETMSIGGIA
401: MSSQTITIGV SEILNLLRTL GEGCRLSYMY RCQEALDTYM KLPHKHYNTG WVLSQVGKAY FELIDYLEAE KAFRLARLAS PYCLEGMDIY STVLYHLKED
501: MKLSYLAQEL ISTDRLAPQS WCAMGNCYSL QKDHETALKN FLRAVQLNPR FAYAHTLCGH EYTTLEDFEN GMKSYQNALR VDTRHYNAWY GLGMIYLRQE
601: KLEFSEHHFR MAFLINPSSS VIMSYLGTSL HALKRSEEAL EIMEQAIVAD RKNPLPMYQK ANILVCLERL DEALEVLEEL KEYAPSESSV YALMGRIYKR
701: RNMHDKAMLH FGLALDMKPP ATDVAAIKAA MEKLHVPDEI DESP
Arabidopsis Description
CDC27BCell division cycle protein 27 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8LGU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.