Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G341200.1 | Wheat | nucleus, plastid | 84.72 | 93.16 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 84.19 | 92.4 |
| Zm00001d027430_P001 | Maize | plastid | 74.42 | 81.52 |
| Zm00001d048472_P001 | Maize | nucleus, plastid | 74.96 | 81.15 |
| Os03t0123300-01 | Rice | plastid | 75.31 | 81.07 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 60.39 | 80.38 |
| TraesCS7B01G353500.1 | Wheat | plastid | 57.55 | 80.0 |
| VIT_02s0025g04680.t01 | Wine grape | cytosol, nucleus, plastid | 58.44 | 72.79 |
| KRH57275 | Soybean | nucleus | 59.33 | 72.77 |
| GSMUA_Achr11P... | Banana | plastid | 62.52 | 72.43 |
| Bra019347.1-P | Field mustard | nucleus, plastid | 58.44 | 70.0 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 58.97 | 69.46 |
| CDY10820 | Canola | nucleus, plastid | 57.9 | 69.36 |
| CDX94473 | Canola | nucleus | 58.08 | 69.28 |
| CDY41283 | Canola | nucleus, plastid | 57.9 | 69.21 |
| Bra013655.1-P | Field mustard | nucleus, plastid | 57.9 | 69.21 |
| KRH77460 | Soybean | nucleus, plastid | 56.13 | 68.85 |
| Solyc08g080080.2.1 | Tomato | nucleus, plastid | 58.79 | 68.81 |
| AT4G22910.1 | Thale cress | nucleus, plastid | 58.97 | 68.74 |
| AT4G11920.1 | Thale cress | nucleus | 57.9 | 68.63 |
| Bra029426.1-P | Field mustard | nucleus | 57.55 | 68.21 |
| CDX86737 | Canola | nucleus | 57.55 | 68.21 |
| Bra000756.1-P | Field mustard | nucleus | 56.31 | 67.45 |
| GSMUA_Achr11P... | Banana | plastid | 58.08 | 66.6 |
| CDY51550 | Canola | nucleus | 53.64 | 66.52 |
| CDX90811 | Canola | nucleus | 53.46 | 66.45 |
| Solyc12g056490.1.1 | Tomato | nucleus, plastid | 56.48 | 66.11 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 56.13 | 65.02 |
| KRH04001 | Soybean | mitochondrion | 60.39 | 64.64 |
| CDX94136 | Canola | nucleus, plastid | 43.69 | 64.4 |
| OQU93351 | Sorghum | nucleus | 77.98 | 63.07 |
| KRH27985 | Soybean | nucleus, plastid | 48.49 | 60.13 |
| HORVU3Hr1G115170.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 53.64 | 51.45 |
| CDY71640 | Canola | nucleus, plastid | 21.31 | 50.0 |
| HORVU5Hr1G041780.3 | Barley | plastid | 32.33 | 33.64 |
| HORVU5Hr1G074370.15 | Barley | endoplasmic reticulum, vacuole | 28.24 | 33.47 |
| HORVU6Hr1G068080.3 | Barley | plastid | 30.37 | 32.08 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | UniProt:A0A287PXP4 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009825 | GO:GO:0009987 |
| GO:GO:0010091 | GO:GO:0010997 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0019538 | GO:GO:0030154 |
| GO:GO:0030234 | GO:GO:0040007 | GO:GO:0042023 | GO:GO:0097027 | GO:GO:1904668 | EnsemblPlantsGene:HORVU4Hr1G084710 |
| EnsemblPlants:HORVU4Hr1G084710.1 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF12894 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI000B46B19C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:629589221..629593649
Molecular Weight (calculated)
60164.4 Da
IEP (calculated)
10.257
GRAVY (calculated)
-0.442
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: RGKERESARA RRATPSTIAT AGNSKRREKP SHPTPTPTPH PXPPSPRSPI RLAMDQHHHQ QGQPADGNSK PPTPSSTPTS RHATGAAAAP WPPSSASSAP
101: PRGPASSSAP ATPASRTVYS DRFIPSRTGS NLALFDLAPA PAPSATASSS SAGSAAPSPY CALLRAALFG PDTPDRLASS AAASSSSSPV GSPAGGNIFR
201: FKAEVPRNAK RALFAAGDDQ DLLFPGLFSP KGSGPRKIPR SPYKVLDAPA LQDDFYLNLV DWSSHNVLSV GLGNCVYLWN ACSSKVTKLC DLGADDTVCS
301: VSWAQRGTHL AVGTNQGTVQ IWDATRCKRM RTMESHRMRV GALAWNSSLL SSGSRDKNIL HHDLRAPEDY VSKLTGHKSE VCGLKWSYDN RQLASGGNDN
401: KLFVWNQHSV QPVLKYTEHT AAVKAIAWSP HLHGLLASGG GTADRCIRFW NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK
501: LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS PKSQSSDSLS SIGATSFVRS YIR
101: PRGPASSSAP ATPASRTVYS DRFIPSRTGS NLALFDLAPA PAPSATASSS SAGSAAPSPY CALLRAALFG PDTPDRLASS AAASSSSSPV GSPAGGNIFR
201: FKAEVPRNAK RALFAAGDDQ DLLFPGLFSP KGSGPRKIPR SPYKVLDAPA LQDDFYLNLV DWSSHNVLSV GLGNCVYLWN ACSSKVTKLC DLGADDTVCS
301: VSWAQRGTHL AVGTNQGTVQ IWDATRCKRM RTMESHRMRV GALAWNSSLL SSGSRDKNIL HHDLRAPEDY VSKLTGHKSE VCGLKWSYDN RQLASGGNDN
401: KLFVWNQHSV QPVLKYTEHT AAVKAIAWSP HLHGLLASGG GTADRCIRFW NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK
501: LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS PKSQSSDSLS SIGATSFVRS YIR
001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
Arabidopsis Description
FZR2FZR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.