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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 100.0 100.0
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 98.94 99.07
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 98.81 98.94
TraesCS3B01G387500.1 Wheat plastid 98.41 98.41
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 84.41 85.77
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 84.02 85.6
Os01t0836600-01 Rice plasma membrane 82.96 83.85
Zm00001d042953_P001 Maize plasma membrane 83.36 82.92
CDY44641 Canola plasma membrane 28.27 72.05
Bra005049.1-P Field mustard plasma membrane 28.14 71.72
Bra005051.1-P Field mustard plastid 55.88 68.89
CDX74853 Canola plastid 56.01 68.72
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 58.12 64.61
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 61.56 64.36
KRH67592 Soybean plastid 62.35 64.31
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 61.29 63.82
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 62.88 63.72
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 60.9 63.67
PGSC0003DMT400029838 Potato extracellular 58.39 63.6
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 61.82 63.59
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 60.24 63.51
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 60.77 63.36
CDX69629 Canola plastid 60.9 63.32
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 55.88 63.32
KRG95875 Soybean cytosol, peroxisome, plasma membrane 60.9 62.64
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 60.9 62.64
CDX93388 Canola plasma membrane 61.29 62.62
AT2G39350.1 Thale cress cytosol 61.16 62.57
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 61.29 62.53
Solyc05g054890.2.1 Tomato cytosol 61.96 62.53
KRG92984 Soybean cytosol, peroxisome, plasma membrane 61.82 62.4
CDY18451 Canola cytosol, peroxisome, plasma membrane 61.16 62.4
AT3G53510.1 Thale cress plasma membrane 60.63 62.11
Solyc04g010210.1.1 Tomato extracellular 57.99 61.48
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 60.37 61.42
CDY09810 Canola plastid 60.9 61.3
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 60.63 60.79
Solyc09g005970.1.1 Tomato plasma membrane 59.05 60.57
PGSC0003DMT400061466 Potato plasma membrane 59.05 60.32
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 52.44 59.97
CDX73549 Canola cytosol, peroxisome, plasma membrane 59.31 59.39
CDY02907 Canola cytosol, peroxisome, plasma membrane 49.8 59.37
CDX76121 Canola cytosol 36.2 58.17
CDX76119 Canola cytosol, peroxisome, plasma membrane 50.07 56.82
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 52.97 56.64
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 58.78 56.4
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 52.05 56.37
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 52.58 56.29
CDX67624 Canola cytosol, peroxisome, plasma membrane 52.58 56.29
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 52.44 56.07
CDY40201 Canola cytosol 52.18 55.79
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 51.78 55.21
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 51.78 54.07
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 50.99 53.99
CDY65003 Canola cytosol, peroxisome, plasma membrane 50.86 53.92
CDY37656 Canola cytosol, peroxisome, plasma membrane 50.73 53.86
CDX73404 Canola plasma membrane 52.58 50.44
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 59.71 47.78
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 40.95 47.26
CDY50899 Canola cytosol 20.74 47.15
Bra014774.1-P Field mustard plasma membrane 37.91 45.34
HORVU5Hr1G021110.1 Barley cytosol 25.63 45.22
HORVU4Hr1G058070.2 Barley cytosol 47.42 44.05
HORVU5Hr1G060690.4 Barley mitochondrion 35.4 36.97
CDX76122 Canola plasma membrane 61.43 36.27
Bra014776.1-P Field mustard cytosol 61.43 36.22
HORVU3Hr1G054160.1 Barley plastid 29.06 36.18
CDY02906 Canola plasma membrane 60.9 35.88
HORVU1Hr1G056890.2 Barley cytosol 27.87 32.21
HORVU2Hr1G124860.3 Barley nucleus, peroxisome, plastid 22.99 31.41
HORVU7Hr1G081250.1 Barley mitochondrion 26.95 30.91
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 14.53 28.8
HORVU4Hr1G018800.7 Barley plastid 24.31 28.66
HORVU7Hr1G014870.1 Barley cytosol, peroxisome, plasma membrane 24.7 27.3
HORVU4Hr1G072620.1 Barley plastid 25.76 25.76
HORVU3Hr1G066220.1 Barley plastid 25.89 24.59
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 22.19 22.95
HORVU3Hr1G005830.3 Barley cytosol 9.38 18.78
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EMBL:AK366153UniProt:F2DQI5GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
EnsemblPlantsGene:HORVU0Hr1G007130EnsemblPlants:HORVU0Hr1G007130.1InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF453SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0002006C0CSEG:seg:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DQI5]
Coordinates
chrchrUn:-:40994826..40997099
Molecular Weight (calculated)
81283.4 Da
IEP (calculated)
9.319
GRAVY (calculated)
0.234
Length
757 amino acids
Sequence
(BLAST)
001: MHAMARAVHD RLPFLASPEP ALAPPAPAGR RRNPSLSEML SLVSAATVDP AGTDDDGSVF SLPMPQSAAA GVGDNNAGGE APGRTIQFRL AFTDLTYSVR
101: RARHGGDGGG GGPCLPVQRR SDRVTAAPDA HAPRTKALLA GVSGEAKEGE ILAVMGASGS GKSTLIDALA NRISRDALKG SVTLNGEPLT GNILKSMSAY
201: VMQDDLLFPM LTVTETLSFA ADFRLPRSLC AAKKRARVHA LIDQLGLRAA ANTIIGDEGH RGVSGGERRR VSIGTDIIHD PILLFLDEPT SGLDSTSAFM
301: VVKVLRRIAE SGSIVITSIH QPSQRILGLL DRLILLSGGH TVFSGAPSAL PTYFAEFGHP VPDDENRAEF ALDLIRELEA SPTGTKPLVE FHRTWKLMHA
401: ARSDDAAAWA PTMSLKEAIS ASISRGKLVS GADVSSGEAA SMHTYANPFW VEMKVLTKRS AINTRRMPEL FLIRLGAVVV TGVILATVFF KLDQSPKGAQ
501: ERLGFFAFAM STMFYTCADA LPVFLQERYV FLRETAYGAY RHVSYVLSNA IVSFPPLVVL SLAFALTTFF AVGLAGGASG FAFYTLAILA SFWAGSGFVT
601: FLSGVIPHVM IGYTVVVAIL AYFLLFSGFF INRDRIPAYW LWFHYLSLVK YPFEGVLQNE FARGGECFVR GAQIFDNSPL GALPEAVKER VLASISSALG
701: VGIGADTCVA TGRSVLRQAA VTQLGKWECL LVTAAWGFFF RILFYFSLVL GSKNKRR
Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Arabidopsis Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.