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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 95.08 98.48
CDX69629 Canola plastid 95.21 98.35
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 89.1 92.16
CDY44641 Canola plasma membrane 32.71 82.83
CDX74853 Canola plastid 64.89 79.09
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 72.47 75.28
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 73.67 74.16
KRG92984 Soybean cytosol, peroxisome, plasma membrane 73.27 73.47
Solyc05g054890.2.1 Tomato cytosol 73.14 73.33
PGSC0003DMT400029838 Potato extracellular 65.96 71.37
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 68.09 71.31
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 68.62 71.27
Solyc04g010210.1.1 Tomato extracellular 66.49 70.03
CDX93388 Canola plasma membrane 66.36 67.34
CDY18451 Canola cytosol, peroxisome, plasma membrane 66.22 67.12
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 61.7 65.72
CDX73549 Canola cytosol, peroxisome, plasma membrane 65.56 65.21
GSMUA_Achr5P28450_001 Banana plasma membrane 60.51 65.19
CDY02907 Canola cytosol, peroxisome, plasma membrane 54.65 64.72
CDY40201 Canola cytosol 60.24 63.98
CDX76119 Canola cytosol, peroxisome, plasma membrane 56.52 63.72
CDX67624 Canola cytosol, peroxisome, plasma membrane 59.71 63.51
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 65.82 62.66
CDX76121 Canola cytosol 39.23 62.63
Os05t0120200-01 Rice plasma membrane 58.11 62.52
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 56.38 62.26
EER95064 Sorghum cytosol, peroxisome, plasma membrane 65.69 62.06
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 56.12 61.97
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 61.04 61.78
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.85 61.67
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 64.89 61.62
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.72 61.53
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 60.9 61.48
Os05t0120000-00 Rice plasma membrane 55.59 61.47
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 65.03 61.43
CDY65003 Canola cytosol, peroxisome, plasma membrane 58.11 61.2
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 56.38 61.1
Zm00001d035553_P001 Maize plasma membrane 57.98 61.06
CDY37656 Canola cytosol, peroxisome, plasma membrane 57.85 61.01
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 61.3 60.9
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 61.3 60.9
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.85 60.69
TraesCS3B01G387500.1 Wheat plastid 61.04 60.63
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 60.9 60.58
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 60.9 60.58
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 56.25 60.43
EES17614 Sorghum cytosol, peroxisome, vacuole 57.05 60.42
EES18923 Sorghum cytosol, peroxisome, plasma membrane 57.31 60.36
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 53.46 60.18
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 56.91 60.11
Os03t0281900-01 Rice cytosol, plasma membrane 62.9 60.1
Os01t0836600-01 Rice plasma membrane 59.84 60.08
Zm00001d042953_P001 Maize plasma membrane 60.51 59.79
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.53 58.52
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 52.26 58.22
CDX73404 Canola plasma membrane 60.9 58.05
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 64.76 57.91
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 56.12 53.49
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 61.3 51.28
CDY50899 Canola cytosol 22.34 50.45
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 40.82 46.8
HORVU4Hr1G058070.2 Barley cytosol 49.73 45.89
HORVU5Hr1G021110.1 Barley cytosol 24.47 42.89
CDX76122 Canola plasma membrane 70.48 41.34
CDY02906 Canola plasma membrane 70.21 41.09
CDX89610 Canola cytosol, peroxisome, plasma membrane 29.65 36.86
CDX93119 Canola cytosol, peroxisome, plasma membrane 29.65 36.86
CDY02516 Canola cytosol, peroxisome, plasma membrane 28.32 36.22
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.44 35.77
CDY13996 Canola plasma membrane 22.74 35.7
CDY59400 Canola cytosol, plasma membrane, plastid 27.79 35.54
CDY27043 Canola plastid 26.46 33.79
GSMUA_Achr6P08820_001 Banana plasma membrane 55.19 33.58
CDX94418 Canola plastid 25.53 33.51
CDX89396 Canola plasma membrane 25.4 33.33
CDX96159 Canola plastid 25.93 33.11
CDY36670 Canola cytosol 15.96 33.06
CDX96366 Canola cytosol 16.09 32.79
CDX92533 Canola plastid 27.26 32.59
CDY29837 Canola plasma membrane 25.27 29.5
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.4 29.38
CDX92829 Canola plasma membrane 25.13 29.35
CDX72849 Canola cytosol, peroxisome, plasma membrane 26.33 29.03
CDY48079 Canola plastid 25.66 29.02
CDY29304 Canola cytosol, peroxisome, plasma membrane 24.6 29.0
CDX89252 Canola cytosol, peroxisome, plasma membrane 24.47 28.84
CDY51602 Canola plastid 25.53 28.83
CDY46506 Canola cytosol, peroxisome, plasma membrane 25.13 28.29
CDY49155 Canola cytosol, peroxisome, plasma membrane 24.34 28.2
CDY47690 Canola cytosol, peroxisome, plastid 23.94 28.08
CDY50951 Canola cytosol, peroxisome, plastid 23.94 28.08
CDY03668 Canola plasma membrane 25.53 27.99
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 25.4 27.92
CDX99764 Canola cytosol, peroxisome, plasma membrane 25.13 27.59
CDX70095 Canola plastid 25.8 26.91
CDY04991 Canola plastid 25.53 26.74
CDX95330 Canola plastid 26.06 26.56
CDY23205 Canola plastid 25.93 26.53
CDY24203 Canola peroxisome 23.27 25.7
CDX98933 Canola plasma membrane 25.8 25.7
CDY12299 Canola cytosol, peroxisome, plasma membrane 24.2 25.56
CDY43362 Canola cytosol, peroxisome, plasma membrane 23.14 25.55
CDY14079 Canola plasma membrane 25.53 25.53
CDY12359 Canola cytosol, nucleus, plasma membrane 9.84 24.58
CDY36671 Canola plasma membrane 10.37 22.54
CDX96365 Canola plasma membrane 11.57 22.54
CDY37372 Canola cytosol, peroxisome, plasma membrane 21.94 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 21.94 22.39
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078F5T5UniProt:A0A078F5T5InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY09810ProteinID:CDY09810ProteinID:CDY09810.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00031528001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE92A4SEG:seg:
Description
BnaC09g43510DBnaC09g43510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5T5]
Coordinates
chrLK031999:+:208544..211397
Molecular Weight (calculated)
83463.3 Da
IEP (calculated)
9.930
GRAVY (calculated)
0.154
Length
752 amino acids
Sequence
(BLAST)
001: MSRVVAADDN MSLPFFSPEP NNLSTFSAAS SSPTFAQLLK NVGDTTTVEL NDHQHHVDMD LASPNQSVPF HLSFNDLTYS VKVRRKFTWK RAPSADPTVG
101: ESLFSSKTKT LLNGISGEAR DGEILAVLGA SGSGKSTLID ALANRIAKGS LKGNVTLNGE VLNSKMQKAI SAYVMQDDLL FPMLTVEETL MFAAEFRLPR
201: SLSKSKKSLR VQALIDQLGL RNAAKTIIGD EGHRGISGGE RRRVSIGNDI IHDPILLFLD EPTSGLDSTS ALSVVKVLKR IAQSGSMVIM TLHQPSYRLL
301: RLLDRLLFLS RGQTVFSGSP AMLPSFFAEF GHPIPERENR TEFALDLIRE LEGSAGGTRS LVEFNKEFRQ RKAEPRTQTG LSLKEAISAS ISKGKLVSGA
401: TTATTTGSGS SPVSTIPTFA NPFWVELLVL AKRSMTNYRR QPELFGIRLG AVLVTGFILA TMFWQLDNSP KGVQERLGFF AFAMSTTFYT CADALPVFLQ
501: ERFIFMRETA YNAYRRSSYV LSHSLVALPS LIILSLAFAA TTFWAVGLDG GLMGFLFYFL IVLAAFWAGS SFVTFLSGVV PHVMLGYTIV VAILAYFLLF
601: SGFFITRDRI PAYWIWFHYI SLVKYPYEAV LINEFSDPTK CFIRGVQIFD NTPLAAVPQG MKVKLLSTMS KSLGMRITSS TCLTTGYDIL QQQGVTDLSK
701: WNCLWITVAW GFFFRILFYF SLLLGSKNKR RQGWYSLYFK FHKDVYLCLA LN
Best Arabidopsis Sequence Match ( AT5G13580.1 )
(BLAST)
001: MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR
Arabidopsis Description
ABCG6ABC transporter G family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.