Factsheet for Zm00001d028689_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	96.08	95.35
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	88.73	88.51
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	88.48	87.81
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	88.73	83.35
Os03t0281900-01	Rice	cytosol, plasma membrane	80.13	80.43
CDY44641	Canola	plasma membrane	27.34	72.73
Bra005049.1-P	Field mustard	plasma membrane	27.22	72.39
Bra005051.1-P	Field mustard	plastid	55.57	71.5
CDX74853	Canola	plastid	55.57	71.15
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	63.16	68.92
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	63.29	67.93
CDX69629	Canola	plastid	62.53	67.86
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	62.28	67.77
HORVU4Hr1G058070.2	Barley	cytosol	69.62	67.48
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	62.03	67.4
Solyc05g054890.2.1	Tomato	cytosol	63.92	67.33
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.16	66.8
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	61.14	66.71
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.38	66.43
KRH67592	Soybean	plastid	61.65	66.35
PGSC0003DMT400029838	Potato	extracellular	58.23	66.19
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	61.65	66.17
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	62.78	66.13
Solyc04g010210.1.1	Tomato	extracellular	59.49	65.83
CDY09810	Canola	plastid	62.66	65.82
AT2G39350.1	Thale cress	cytosol	61.65	65.81
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.27	65.76
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.14	64.92
AT3G53510.1	Thale cress	plasma membrane	60.0	64.14
CDX93388	Canola	plasma membrane	59.87	63.83
CDY18451	Canola	cytosol, peroxisome, plasma membrane	59.75	63.61
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.62	63.48
Solyc09g005970.1.1	Tomato	plasma membrane	59.24	63.41
PGSC0003DMT400061466	Potato	plasma membrane	59.24	63.16
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	60.25	63.05
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	58.86	62.58
CDY02907	Canola	cytosol, peroxisome, plasma membrane	50.13	62.36
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	56.08	62.22
CDX76121	Canola	cytosol	36.84	61.78
Zm00001d035553_P001	Maize	plasma membrane	55.7	61.62
CDX73549	Canola	cytosol, peroxisome, plasma membrane	58.48	61.11
Zm00001d042953_P001	Maize	plasma membrane	58.73	60.97
CDX76119	Canola	cytosol, peroxisome, plasma membrane	51.39	60.87
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	50.89	60.73
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	54.05	60.31
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.16	60.09
CDX67624	Canola	cytosol, peroxisome, plasma membrane	53.67	59.97
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.8	59.86
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.54	59.83
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.42	59.6
CDY40201	Canola	cytosol	53.29	59.46
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	52.91	57.66
CDY37656	Canola	cytosol, peroxisome, plasma membrane	51.52	57.08
CDY65003	Canola	cytosol, peroxisome, plasma membrane	51.27	56.72
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.01	56.36
CDX73404	Canola	plasma membrane	53.42	53.49
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.86	49.15
CDY50899	Canola	cytosol	20.63	48.95
Bra014774.1-P	Field mustard	plasma membrane	38.1	47.55
CDX76122	Canola	plasma membrane	61.52	37.91
Bra014776.1-P	Field mustard	cytosol	61.52	37.85
CDY02906	Canola	plasma membrane	61.14	37.59
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	34.3	36.72
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	22.15	34.52
GSMUA_Achr6P08820_001	Banana	plasma membrane	53.8	34.39
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	25.44	33.0
Zm00001d024075_P001	Maize	cytosol	35.95	31.84
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	24.81	31.72
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	26.46	30.12
Zm00001d004762_P001	Maize	plasma membrane	22.91	28.64
Zm00001d053049_P001	Maize	plasma membrane	22.66	28.14
Zm00001d026706_P005	Maize	plasma membrane	26.33	27.73
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	23.04	26.92
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	9.37	26.91
Zm00001d024497_P001	Maize	plastid	23.54	25.58
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	23.92	25.1
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	21.77	24.75

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
UniProt:B6U174	EMBL:EU970989	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628
GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009739	GO:GO:0009751
GO:GO:0009753	GO:GO:0009987	GO:GO:0010345	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0019748	GO:GO:0030312	GO:GO:0048225	GO:GO:0048226	GO:GO:0055075
GO:GO:0055078	GO:GO:0071456	GO:GO:0071470	GO:GO:0071472	GO:GO:1901002	GO:GO:1902074
GO:GO:2000032	InterPro:IPR003439	ProteinID:ONL96732.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000182E6B4	EnsemblPlantsGene:Zm00001d028689	EnsemblPlants:Zm00001d028689_P001	EnsemblPlants:Zm00001d028689_T001	SEG:seg

Description

ATPase%2C coupled to transmembrane movement of substances

Coordinates

chr1:+:43282276..43284648

Molecular Weight (calculated)

86955.4 Da

IEP (calculated)

9.453

GRAVY (calculated)

0.076

Length

790 amino acids

Sequence
(BLAST)

001: MSRFVDKLPF FDRRSSLMEE AGDIPRSGLL HMHHHQPHHS GLLMQPQPSP PAKQSSFTLA QLLKRVNEAR SDASSPTSSP THSHYTIELG GSVPGSTGSD
101: LSERIGGGGG DGPLLPFVLK FTDLTYSVKQ RKRGPCLPVL PFRRGAGEPA EPEVSRMKTL LDNISGEARE GEIMAVLGAS GSGKSTLIDA LANRIVKESL
201: RGSVTLNGES LDSNLLKVIS AYVMQDDLLY PMLTVEETLM FAAEFRLPRS LPTKEKKKRV QALIDQLGLR NAANTIIGDE GHRGVSGGER RRVSIGVDII
301: HDPIVLFLDE PTSGLDSTSA FMVVKVLQRI AQSGSVVVMS IHQPSYRILG LLDRLLFLSR GQTVYYGPPG ALPSFFNDFG KPIPGNENPT EFALDLIREL
401: ETMPDGATDL VEHNKKWQMR TAPKAKHHDG HGEKPSLSLK EAISASISRG KLVSGATDGS VSVHSAGESA PAAAVSKFAN PFWVEMGVLT RRAFLNTKRT
501: PEIFIIRLAA VMVTGFILAT IFWRLDDSPK GVQERLGFFA IAMSTMFYTC SDSLPVFLNE RYIFLRETAY NAYRRSSYVL SHTIVGFPSL IVLSFAFALT
601: TFFAVGLAGG ADGFFFFVAI VLASFWAGSG FATFLSGVVT NVMLGFPVVV STLAYFLLFS GFFINRDRIP RYWLWFHYLS LVKYPYEAVM QNEFSDPTRC
701: FVRGVQMFDN TPLAVLPAVL KVRVLRAMSQ SLGVDIGTAT CITTGPDFLA QQAVTDLTKW DCLWITVAWG FLFRILFYIS LLLGSRNKRR

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.