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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76121 Canola cytosol 70.71 95.33
CDY40201 Canola cytosol 86.77 77.82
CDX67624 Canola cytosol, peroxisome, plasma membrane 85.51 76.8
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 83.62 75.0
CDX73404 Canola plasma membrane 87.24 70.22
CDX76119 Canola cytosol, peroxisome, plasma membrane 73.23 69.72
CDY65003 Canola cytosol, peroxisome, plasma membrane 74.8 66.53
CDY37656 Canola cytosol, peroxisome, plasma membrane 74.65 66.48
CDX74853 Canola plastid 58.58 60.29
CDY44641 Canola plasma membrane 27.72 59.26
CDX69629 Canola plastid 64.72 56.46
GSMUA_Achr5P28450_001 Banana plasma membrane 61.57 56.02
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 61.42 55.24
CDY09810 Canola plastid 64.72 54.65
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.48 53.6
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.32 53.45
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.17 53.3
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 56.69 52.86
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 57.48 52.75
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 57.48 52.59
Os05t0120200-01 Rice plasma membrane 57.8 52.5
Os05t0120000-00 Rice plasma membrane 56.22 52.5
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 55.12 52.4
CDX93388 Canola plasma membrane 61.1 52.36
CDY18451 Canola cytosol, peroxisome, plasma membrane 60.94 52.16
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 57.48 52.14
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 54.49 51.26
EES18923 Sorghum cytosol, peroxisome, plasma membrane 57.48 51.12
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 54.17 50.96
EES17614 Sorghum cytosol, peroxisome, vacuole 56.85 50.85
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 57.01 50.84
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 59.37 50.74
CDX73549 Canola cytosol, peroxisome, plasma membrane 60.31 50.66
Zm00001d035553_P001 Maize plasma membrane 56.85 50.56
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 59.21 50.47
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 62.36 50.13
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 59.37 49.8
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 59.37 49.8
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 59.21 49.74
TraesCS3B01G387500.1 Wheat plastid 59.21 49.67
Os01t0836600-01 Rice plasma membrane 58.58 49.67
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 59.06 49.6
Zm00001d042953_P001 Maize plasma membrane 59.37 49.54
EER95064 Sorghum cytosol, peroxisome, plasma membrane 62.05 49.5
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 61.42 48.99
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 61.1 48.99
Os03t0281900-01 Rice cytosol, plasma membrane 59.53 48.03
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 61.1 46.14
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 57.32 46.13
CDY50899 Canola cytosol 23.78 45.35
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 60.79 42.94
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 38.43 37.2
HORVU5Hr1G021110.1 Barley cytosol 24.72 36.6
HORVU4Hr1G058070.2 Barley cytosol 46.14 35.95
CDY02516 Canola cytosol, peroxisome, plasma membrane 32.44 35.03
CDY59400 Canola cytosol, plasma membrane, plastid 31.97 34.52
CDX94418 Canola plastid 30.71 34.03
CDX89396 Canola plasma membrane 30.55 33.86
CDX89610 Canola cytosol, peroxisome, plasma membrane 32.13 33.72
CDY27043 Canola plastid 31.18 33.62
CDX93119 Canola cytosol, peroxisome, plasma membrane 31.97 33.55
CDY13996 Canola plasma membrane 25.04 33.19
CDX96159 Canola plastid 30.55 32.94
CDX76122 Canola plasma membrane 65.35 32.37
CDX96366 Canola cytosol 18.74 32.25
CDY02906 Canola plasma membrane 65.2 32.22
CDX92533 Canola plastid 31.5 31.8
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.95 31.46
CDY36670 Canola cytosol 17.8 31.13
GSMUA_Achr6P08820_001 Banana plasma membrane 56.54 29.05
CDX68292 Canola cytosol, peroxisome, plasma membrane 28.19 27.54
CDX72849 Canola cytosol, peroxisome, plasma membrane 29.13 27.13
CDX92829 Canola plasma membrane 26.77 26.4
CDY03668 Canola plasma membrane 28.5 26.38
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 28.35 26.32
CDY29837 Canola plasma membrane 26.61 26.24
CDY48079 Canola plastid 27.09 25.86
CDY47690 Canola cytosol, peroxisome, plastid 25.98 25.74
CDY50951 Canola cytosol, peroxisome, plastid 25.98 25.74
CDY49155 Canola cytosol, peroxisome, plasma membrane 26.3 25.73
CDY51602 Canola plastid 26.93 25.68
CDY04991 Canola plastid 28.98 25.63
CDY23205 Canola plastid 29.61 25.58
CDX70095 Canola plastid 28.98 25.52
CDX95330 Canola plastid 29.45 25.34
CDY29304 Canola cytosol, peroxisome, plasma membrane 25.35 25.24
CDY46506 Canola cytosol, peroxisome, plasma membrane 26.46 25.15
CDX89252 Canola cytosol, peroxisome, plasma membrane 25.2 25.08
CDY14079 Canola plasma membrane 29.45 24.87
CDX99764 Canola cytosol, peroxisome, plasma membrane 26.61 24.67
CDX98933 Canola plasma membrane 28.98 24.37
CDY12299 Canola cytosol, peroxisome, plasma membrane 26.14 23.31
CDY43362 Canola cytosol, peroxisome, plasma membrane 24.72 23.05
CDY24203 Canola peroxisome 24.72 23.05
CDY12359 Canola cytosol, nucleus, plasma membrane 10.87 22.92
CDY37372 Canola cytosol, peroxisome, plasma membrane 25.35 21.96
CDY40385 Canola cytosol, peroxisome, plasma membrane 25.35 21.85
CDX96365 Canola plasma membrane 12.28 20.21
CDY36671 Canola plasma membrane 10.87 19.94
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078EP75InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDY02907ProteinID:CDY02907ProteinID:CDY02907.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00115145001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EDAF8CSEG:seg:::
Description
BnaC04g25790D
Coordinates
chrLK031938:-:268023..270122
Molecular Weight (calculated)
70763.8 Da
IEP (calculated)
7.079
GRAVY (calculated)
0.162
Length
635 amino acids
Sequence
(BLAST)
001: MPRVAAESQE ISLDGGWESP TLGELLKDLE DGHRKKDSGE DASVHHVLDV ASPETRPVPF LLSFNNLCYD VRGKADSVKT LLNDVSGEVC DGDVLAVLGA
101: SGAGKSTLID ALAGRVSSLR GTVTLNGEKV LKSQLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMERV EALIDKLGLR NAADTIIGDE
201: GHRGVSGGER RRVSIGADII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI ARSGSMVIMS IHQPSARIID LLDRLIILSR GKSVFSGYPT SLPQFLSDFG
301: HPVPGKENIT EFALDLVREL EGSTKGTEDV SRGKLVSGST SSNPISMETV SYANTPLVEA YILSKRYIKN WSRTPELIIT RLATVLVTGL ILATIYWRLD
401: NTPRGAQERM AFFSFAMSTM FYTCADNLPV FIHERYIFLR ETTHNAYRTY SYVISHVLVS LPQLLALSIA FAVTTFWTVG LSGGLESFLY YCLIIYAAFW
501: SGSSFVTFIS GLIPNVMISF MVTISYLSYC LLMGGFFINR DRIPGYWIWF HYISLMKYPY EAVLINEFDD PSRCFVRGVQ ITESTCLRTG PDLLLQQGIS
601: QLSKWDCLWV TFAWGIFFRI LFYLSLLFGS KNKRT
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.