Factsheet for TraesCS1D01G052000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	98.7	98.42
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	97.25	96.14
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	83.81	85.17
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	96.68	84.79
Os05t0120000-00	Rice	plasma membrane	75.0	76.32
Bra005049.1-P	Field mustard	plasma membrane	29.77	69.36
CDY44641	Canola	plasma membrane	29.62	69.02
Bra005051.1-P	Field mustard	plastid	57.08	64.33
CDX74853	Canola	plastid	57.08	64.02
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	62.72	59.94
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	65.03	59.52
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.26	58.08
Solyc05g054890.2.1	Tomato	cytosol	62.86	58.0
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	60.84	57.99
PGSC0003DMT400029838	Potato	extracellular	58.24	57.99
CDX69629	Canola	plastid	60.69	57.69
KRH67592	Soybean	plastid	61.13	57.63
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	60.4	57.5
CDY02907	Canola	cytosol, peroxisome, plasma membrane	52.75	57.48
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	61.13	57.47
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.13	57.47
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	59.97	57.32
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	60.84	57.2
AT2G39350.1	Thale cress	cytosol	61.13	57.16
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.71	57.16
Solyc04g010210.1.1	Tomato	extracellular	58.67	56.86
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	60.84	56.59
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	54.05	56.5
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	60.84	56.13
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	57.23	55.93
CDY09810	Canola	plastid	60.69	55.85
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.83	55.8
CDX93388	Canola	plasma membrane	59.68	55.74
CDY18451	Canola	cytosol, peroxisome, plasma membrane	59.68	55.66
CDY40201	Canola	cytosol	56.94	55.65
CDX76119	Canola	cytosol, peroxisome, plasma membrane	53.47	55.47
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.65	55.37
AT3G53510.1	Thale cress	plasma membrane	58.96	55.21
PGSC0003DMT400061466	Potato	plasma membrane	58.96	55.06
Solyc09g005970.1.1	Tomato	plasma membrane	58.67	55.01
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.49	54.94
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.92	54.74
CDX67624	Canola	cytosol, peroxisome, plasma membrane	55.92	54.74
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	59.68	54.7
CDX76121	Canola	cytosol	37.14	54.56
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.35	53.94
CDX73549	Canola	cytosol, peroxisome, plasma membrane	57.66	52.78
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	54.77	52.28
CDY65003	Canola	cytosol, peroxisome, plasma membrane	52.89	51.26
CDY37656	Canola	cytosol, peroxisome, plasma membrane	52.6	51.05
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.75	51.05
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	60.98	50.18
CDX73404	Canola	plasma membrane	56.94	49.94
CDY50899	Canola	cytosol	20.95	43.54
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.53	42.81
Bra014774.1-P	Field mustard	plasma membrane	38.58	42.18
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	33.38	38.18
TraesCS3D01G254600.1	Wheat	cytosol, peroxisome, plasma membrane	39.31	37.73
TraesCS1D01G240600.1	Wheat	plasma membrane	31.36	33.23
TraesCS2D01G585300.1	Wheat	plasma membrane	32.23	33.09
CDX76122	Canola	plasma membrane	61.27	33.07
Bra014776.1-P	Field mustard	cytosol	61.27	33.02
CDY02906	Canola	plasma membrane	60.69	32.68
TraesCS5D01G211000.1	Wheat	cytosol	41.04	32.27
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	30.64	32.02
TraesCS4D01G092000.1	Wheat	plasma membrane	27.02	28.86
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	27.46	27.66
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	25.72	26.85
TraesCS4D01G271500.1	Wheat	plastid	28.03	25.8
TraesCS3D01G019000.1	Wheat	golgi	24.57	25.53

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF294	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G052000	EnsemblPlants:TraesCS1D01G052000.1	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:32737966..32740044

Molecular Weight (calculated)

74989.4 Da

IEP (calculated)

9.132

GRAVY (calculated)

0.242

Length

692 amino acids

Sequence
(BLAST)

001: MSTSGHIAVE VDDAERELQL LVSAGPPVPY TLSFTDLSYR VRQGRGGLMG CLPSRASNRL ASTDAPPANT KALLDGVSGE AREGELFAVM GASGSGKSTL
101: VDALAGRIAR DSLRGHVTLN GEPLHGSRLR AISAYVMQDD LLYPMLTVRE TLLFAAELRL SRALSPAAKR ERVDRLIDQL GLSRAADTII GDEGHRGVSG
201: GERRRVSIGT DIIHDPILLF LDEPTSGLDS ASAFMVVQVL RTIARSGSVV VMTIHQPSAR ILGILGRLLL LSRGRTVYAG TPAGLKPFFA EFGAPIPDNE
301: NPAEFALDTI REREAQQPDG TGPLADFNAR WQATHKAMDG TNAKRVSPMT LEYAIAESVA RGKLVAGSGT GTVSLQMPTY ANPMPVEVWV LIKRAFTNTQ
401: RMPELFGMRL GTIMVTGLIL ATIFLRLDDT PKGVQERLGF FAMGMSTMFY VCADALPVFV QERHIYLRET AHNAYRRASY VLANAVVSFP PLVALSLAFA
501: VTTFFAVGLA GGASSFLYFS LIILASLWAG SGFVTFLSAV VPHVMLGYTV VVAILAYFLL FSGFFINRDR IPDYWIWFHY ISLVKYPYQA VLQNEFGDAT
601: RCFARGTQMF DGTPIGGMPE AIKMKVLGAI GNALGTHMTS HTCVLTGADV LAQQAVTDLG KWMCLLVTAG FGFFFRALFY VVLLVGSKNK RK

Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)

001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT

Arabidopsis Description

ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.